Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Sfr1Q8BP27 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.21■□□□□ 0.67
Sfr1Q8BP27 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sfr1Q8BP27 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sfr1Q8BP27 Gm7860-201ENSMUST00000121190 879 ntBASIC19.21■□□□□ 0.67
Sfr1Q8BP27 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Sfr1Q8BP27 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sfr1Q8BP27 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.21■□□□□ 0.67
Sfr1Q8BP27 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.21■□□□□ 0.67
Sfr1Q8BP27 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.21■□□□□ 0.67
Sfr1Q8BP27 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sfr1Q8BP27 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sfr1Q8BP27 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
Sfr1Q8BP27 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sfr1Q8BP27 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sfr1Q8BP27 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sfr1Q8BP27 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sfr1Q8BP27 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.2■□□□□ 0.66
Sfr1Q8BP27 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sfr1Q8BP27 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sfr1Q8BP27 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Sfr1Q8BP27 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Sfr1Q8BP27 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sfr1Q8BP27 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sfr1Q8BP27 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sfr1Q8BP27 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sfr1Q8BP27 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
Sfr1Q8BP27 Gm10033-202ENSMUST00000211874 928 ntBASIC19.19■□□□□ 0.66
Sfr1Q8BP27 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sfr1Q8BP27 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sfr1Q8BP27 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Sfr1Q8BP27 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.19■□□□□ 0.66
Sfr1Q8BP27 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sfr1Q8BP27 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sfr1Q8BP27 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sfr1Q8BP27 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sfr1Q8BP27 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Sfr1Q8BP27 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.18■□□□□ 0.66
Sfr1Q8BP27 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sfr1Q8BP27 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.18■□□□□ 0.66
Sfr1Q8BP27 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Sfr1Q8BP27 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Sfr1Q8BP27 Gm38205-201ENSMUST00000192243 258 ntBASIC19.18■□□□□ 0.66
Sfr1Q8BP27 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sfr1Q8BP27 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sfr1Q8BP27 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sfr1Q8BP27 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sfr1Q8BP27 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.18■□□□□ 0.66
Sfr1Q8BP27 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.18■□□□□ 0.66
Sfr1Q8BP27 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sfr1Q8BP27 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sfr1Q8BP27 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sfr1Q8BP27 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sfr1Q8BP27 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.17■□□□□ 0.66
Sfr1Q8BP27 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sfr1Q8BP27 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.17■□□□□ 0.66
Sfr1Q8BP27 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sfr1Q8BP27 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sfr1Q8BP27 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Sfr1Q8BP27 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sfr1Q8BP27 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sfr1Q8BP27 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sfr1Q8BP27 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sfr1Q8BP27 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sfr1Q8BP27 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sfr1Q8BP27 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.16■□□□□ 0.66
Sfr1Q8BP27 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sfr1Q8BP27 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sfr1Q8BP27 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sfr1Q8BP27 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.16■□□□□ 0.66
Sfr1Q8BP27 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sfr1Q8BP27 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sfr1Q8BP27 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sfr1Q8BP27 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.15■□□□□ 0.66
Sfr1Q8BP27 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sfr1Q8BP27 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sfr1Q8BP27 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sfr1Q8BP27 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sfr1Q8BP27 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sfr1Q8BP27 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.15■□□□□ 0.66
Sfr1Q8BP27 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.15■□□□□ 0.66
Sfr1Q8BP27 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sfr1Q8BP27 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sfr1Q8BP27 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Sfr1Q8BP27 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sfr1Q8BP27 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sfr1Q8BP27 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Sfr1Q8BP27 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Sfr1Q8BP27 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sfr1Q8BP27 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sfr1Q8BP27 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sfr1Q8BP27 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Sfr1Q8BP27 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Sfr1Q8BP27 AV356131-201ENSMUST00000206201 750 ntBASIC19.14■□□□□ 0.65
Sfr1Q8BP27 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sfr1Q8BP27 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sfr1Q8BP27 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.14■□□□□ 0.65
Sfr1Q8BP27 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.14■□□□□ 0.65
Sfr1Q8BP27 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sfr1Q8BP27 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms