Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Col16a1Q8BLX7 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Col16a1Q8BLX7 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
Col16a1Q8BLX7 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
Col16a1Q8BLX7 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC25.28■■□□□ 1.64
Col16a1Q8BLX7 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Col16a1Q8BLX7 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Col16a1Q8BLX7 Gm43672-201ENSMUST00000199072 1731 ntBASIC25.27■■□□□ 1.64
Col16a1Q8BLX7 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Col16a1Q8BLX7 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Col16a1Q8BLX7 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC25.27■■□□□ 1.64
Col16a1Q8BLX7 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Col16a1Q8BLX7 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
Col16a1Q8BLX7 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Col16a1Q8BLX7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC25.27■■□□□ 1.64
Col16a1Q8BLX7 Gm2399-201ENSMUST00000104944 225 ntBASIC25.27■■□□□ 1.64
Col16a1Q8BLX7 Mir1199-201ENSMUST00000117015 119 ntBASIC25.27■■□□□ 1.64
Col16a1Q8BLX7 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Col16a1Q8BLX7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
Col16a1Q8BLX7 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Col16a1Q8BLX7 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Col16a1Q8BLX7 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Col16a1Q8BLX7 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Col16a1Q8BLX7 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Col16a1Q8BLX7 Nrn1-203ENSMUST00000223611 1443 ntBASIC25.25■■□□□ 1.63
Col16a1Q8BLX7 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Col16a1Q8BLX7 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC25.25■■□□□ 1.63
Col16a1Q8BLX7 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Col16a1Q8BLX7 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
Col16a1Q8BLX7 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC25.25■■□□□ 1.63
Col16a1Q8BLX7 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Col16a1Q8BLX7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC25.24■■□□□ 1.63
Col16a1Q8BLX7 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Col16a1Q8BLX7 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Col16a1Q8BLX7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Col16a1Q8BLX7 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Col16a1Q8BLX7 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Col16a1Q8BLX7 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Col16a1Q8BLX7 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Col16a1Q8BLX7 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC25.22■■□□□ 1.63
Col16a1Q8BLX7 Gm19094-201ENSMUST00000209791 1246 ntBASIC25.22■■□□□ 1.63
Col16a1Q8BLX7 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Col16a1Q8BLX7 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Col16a1Q8BLX7 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Col16a1Q8BLX7 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Col16a1Q8BLX7 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC25.22■■□□□ 1.63
Col16a1Q8BLX7 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC25.22■■□□□ 1.63
Col16a1Q8BLX7 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC25.22■■□□□ 1.63
Col16a1Q8BLX7 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
Col16a1Q8BLX7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Col16a1Q8BLX7 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC25.22■■□□□ 1.63
Col16a1Q8BLX7 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Col16a1Q8BLX7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Col16a1Q8BLX7 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Col16a1Q8BLX7 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
Col16a1Q8BLX7 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Col16a1Q8BLX7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
Col16a1Q8BLX7 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
Col16a1Q8BLX7 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Col16a1Q8BLX7 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC25.2■■□□□ 1.62
Col16a1Q8BLX7 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
Col16a1Q8BLX7 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC25.2■■□□□ 1.62
Col16a1Q8BLX7 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC25.2■■□□□ 1.62
Col16a1Q8BLX7 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Col16a1Q8BLX7 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Col16a1Q8BLX7 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC25.19■■□□□ 1.62
Col16a1Q8BLX7 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC25.19■■□□□ 1.62
Col16a1Q8BLX7 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC25.19■■□□□ 1.62
Col16a1Q8BLX7 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC25.19■■□□□ 1.62
Col16a1Q8BLX7 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Col16a1Q8BLX7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Col16a1Q8BLX7 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Col16a1Q8BLX7 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Col16a1Q8BLX7 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Col16a1Q8BLX7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC25.18■■□□□ 1.62
Col16a1Q8BLX7 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC25.18■■□□□ 1.62
Col16a1Q8BLX7 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC25.18■■□□□ 1.62
Col16a1Q8BLX7 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Col16a1Q8BLX7 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Col16a1Q8BLX7 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Col16a1Q8BLX7 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Col16a1Q8BLX7 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Col16a1Q8BLX7 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Col16a1Q8BLX7 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC25.18■■□□□ 1.62
Col16a1Q8BLX7 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC25.18■■□□□ 1.62
Col16a1Q8BLX7 AC163280.1-201ENSMUST00000228194 1100 ntBASIC25.18■■□□□ 1.62
Col16a1Q8BLX7 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Col16a1Q8BLX7 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Col16a1Q8BLX7 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
Col16a1Q8BLX7 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
Col16a1Q8BLX7 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Col16a1Q8BLX7 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Col16a1Q8BLX7 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Col16a1Q8BLX7 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
Col16a1Q8BLX7 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC25.17■■□□□ 1.62
Col16a1Q8BLX7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC25.17■■□□□ 1.62
Col16a1Q8BLX7 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Col16a1Q8BLX7 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Col16a1Q8BLX7 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Col16a1Q8BLX7 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms