Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Srrm4Q8BKA3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Srrm4Q8BKA3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Srrm4Q8BKA3 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Srrm4Q8BKA3 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Srrm4Q8BKA3 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Srrm4Q8BKA3 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Srrm4Q8BKA3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Srrm4Q8BKA3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Srrm4Q8BKA3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.41■□□□□ 0.22
Srrm4Q8BKA3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srrm4Q8BKA3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srrm4Q8BKA3 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srrm4Q8BKA3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srrm4Q8BKA3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Srrm4Q8BKA3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srrm4Q8BKA3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srrm4Q8BKA3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Srrm4Q8BKA3 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Srrm4Q8BKA3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srrm4Q8BKA3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srrm4Q8BKA3 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Srrm4Q8BKA3 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srrm4Q8BKA3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srrm4Q8BKA3 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srrm4Q8BKA3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Srrm4Q8BKA3 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.4■□□□□ 0.22
Srrm4Q8BKA3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Srrm4Q8BKA3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Srrm4Q8BKA3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Srrm4Q8BKA3 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Srrm4Q8BKA3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Srrm4Q8BKA3 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Srrm4Q8BKA3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Srrm4Q8BKA3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Srrm4Q8BKA3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.39■□□□□ 0.21
Srrm4Q8BKA3 Gm42778-201ENSMUST00000199644 553 ntBASIC16.39■□□□□ 0.21
Srrm4Q8BKA3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Srrm4Q8BKA3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Srrm4Q8BKA3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Srrm4Q8BKA3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Srrm4Q8BKA3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Srrm4Q8BKA3 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Srrm4Q8BKA3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Srrm4Q8BKA3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Srrm4Q8BKA3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Srrm4Q8BKA3 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Srrm4Q8BKA3 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Srrm4Q8BKA3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Srrm4Q8BKA3 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srrm4Q8BKA3 Reep4-203ENSMUST00000226563 1444 ntBASIC16.38■□□□□ 0.21
Srrm4Q8BKA3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.38■□□□□ 0.21
Srrm4Q8BKA3 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Srrm4Q8BKA3 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srrm4Q8BKA3 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srrm4Q8BKA3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srrm4Q8BKA3 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srrm4Q8BKA3 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.38■□□□□ 0.21
Srrm4Q8BKA3 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.37■□□□□ 0.21
Srrm4Q8BKA3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Srrm4Q8BKA3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Srrm4Q8BKA3 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.37■□□□□ 0.21
Srrm4Q8BKA3 Gm26571-201ENSMUST00000181399 666 ntBASIC16.37■□□□□ 0.21
Srrm4Q8BKA3 Gm10033-202ENSMUST00000211874 928 ntBASIC16.37■□□□□ 0.21
Srrm4Q8BKA3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Srrm4Q8BKA3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.37■□□□□ 0.21
Srrm4Q8BKA3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Srrm4Q8BKA3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Srrm4Q8BKA3 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Srrm4Q8BKA3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Srrm4Q8BKA3 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Srrm4Q8BKA3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Srrm4Q8BKA3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Srrm4Q8BKA3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Srrm4Q8BKA3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.36■□□□□ 0.21
Srrm4Q8BKA3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Srrm4Q8BKA3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Srrm4Q8BKA3 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Srrm4Q8BKA3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Srrm4Q8BKA3 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.36■□□□□ 0.21
Srrm4Q8BKA3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Srrm4Q8BKA3 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Srrm4Q8BKA3 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
Srrm4Q8BKA3 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Srrm4Q8BKA3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Srrm4Q8BKA3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Srrm4Q8BKA3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Srrm4Q8BKA3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Srrm4Q8BKA3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Srrm4Q8BKA3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Srrm4Q8BKA3 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Srrm4Q8BKA3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Srrm4Q8BKA3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Srrm4Q8BKA3 Gm13234-201ENSMUST00000120010 747 ntBASIC16.35■□□□□ 0.21
Srrm4Q8BKA3 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Srrm4Q8BKA3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Srrm4Q8BKA3 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Srrm4Q8BKA3 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Srrm4Q8BKA3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Srrm4Q8BKA3 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms