Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh20Q8BIZ0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Pcdh20Q8BIZ0 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh20Q8BIZ0 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Pcdh20Q8BIZ0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Pcdh20Q8BIZ0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Pcdh20Q8BIZ0 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
Pcdh20Q8BIZ0 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.44■□□□□ 0.54
Pcdh20Q8BIZ0 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.44■□□□□ 0.54
Pcdh20Q8BIZ0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Pcdh20Q8BIZ0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Pcdh20Q8BIZ0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh20Q8BIZ0 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Pcdh20Q8BIZ0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh20Q8BIZ0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Pcdh20Q8BIZ0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh20Q8BIZ0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh20Q8BIZ0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh20Q8BIZ0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Pcdh20Q8BIZ0 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh20Q8BIZ0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Pcdh20Q8BIZ0 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh20Q8BIZ0 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh20Q8BIZ0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh20Q8BIZ0 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh20Q8BIZ0 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.43■□□□□ 0.54
Pcdh20Q8BIZ0 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh20Q8BIZ0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh20Q8BIZ0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh20Q8BIZ0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Pcdh20Q8BIZ0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh20Q8BIZ0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh20Q8BIZ0 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Pcdh20Q8BIZ0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh20Q8BIZ0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Pcdh20Q8BIZ0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh20Q8BIZ0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh20Q8BIZ0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Pcdh20Q8BIZ0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh20Q8BIZ0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh20Q8BIZ0 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh20Q8BIZ0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Pcdh20Q8BIZ0 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh20Q8BIZ0 Smad6-203ENSMUST00000179458 273 ntBASIC18.42■□□□□ 0.54
Pcdh20Q8BIZ0 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.42■□□□□ 0.54
Pcdh20Q8BIZ0 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh20Q8BIZ0 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Pcdh20Q8BIZ0 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.42■□□□□ 0.54
Pcdh20Q8BIZ0 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh20Q8BIZ0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh20Q8BIZ0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh20Q8BIZ0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh20Q8BIZ0 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh20Q8BIZ0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh20Q8BIZ0 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh20Q8BIZ0 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Pcdh20Q8BIZ0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pcdh20Q8BIZ0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh20Q8BIZ0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh20Q8BIZ0 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh20Q8BIZ0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Pcdh20Q8BIZ0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Pcdh20Q8BIZ0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh20Q8BIZ0 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh20Q8BIZ0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh20Q8BIZ0 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.41■□□□□ 0.54
Pcdh20Q8BIZ0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh20Q8BIZ0 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh20Q8BIZ0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh20Q8BIZ0 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdh20Q8BIZ0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh20Q8BIZ0 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh20Q8BIZ0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh20Q8BIZ0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Pcdh20Q8BIZ0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh20Q8BIZ0 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh20Q8BIZ0 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh20Q8BIZ0 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Pcdh20Q8BIZ0 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Pcdh20Q8BIZ0 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh20Q8BIZ0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.4■□□□□ 0.54
Pcdh20Q8BIZ0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Pcdh20Q8BIZ0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Pcdh20Q8BIZ0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.39■□□□□ 0.54
Pcdh20Q8BIZ0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdh20Q8BIZ0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.39■□□□□ 0.53
Pcdh20Q8BIZ0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh20Q8BIZ0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh20Q8BIZ0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh20Q8BIZ0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Pcdh20Q8BIZ0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.39■□□□□ 0.53
Pcdh20Q8BIZ0 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh20Q8BIZ0 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh20Q8BIZ0 Gm43060-201ENSMUST00000200621 289 ntBASIC18.39■□□□□ 0.53
Pcdh20Q8BIZ0 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.39■□□□□ 0.53
Pcdh20Q8BIZ0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh20Q8BIZ0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh20Q8BIZ0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh20Q8BIZ0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh20Q8BIZ0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms