Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.73■□□□□ 0.43
Clrn3Q8BHH8 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clrn3Q8BHH8 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Clrn3Q8BHH8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clrn3Q8BHH8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clrn3Q8BHH8 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.73■□□□□ 0.43
Clrn3Q8BHH8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.73■□□□□ 0.43
Clrn3Q8BHH8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Clrn3Q8BHH8 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.72■□□□□ 0.43
Clrn3Q8BHH8 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clrn3Q8BHH8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clrn3Q8BHH8 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Clrn3Q8BHH8 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.72■□□□□ 0.43
Clrn3Q8BHH8 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Clrn3Q8BHH8 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.72■□□□□ 0.43
Clrn3Q8BHH8 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Clrn3Q8BHH8 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clrn3Q8BHH8 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.72■□□□□ 0.43
Clrn3Q8BHH8 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clrn3Q8BHH8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clrn3Q8BHH8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Clrn3Q8BHH8 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clrn3Q8BHH8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Clrn3Q8BHH8 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.71■□□□□ 0.43
Clrn3Q8BHH8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clrn3Q8BHH8 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.71■□□□□ 0.43
Clrn3Q8BHH8 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clrn3Q8BHH8 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.71■□□□□ 0.43
Clrn3Q8BHH8 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clrn3Q8BHH8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clrn3Q8BHH8 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Clrn3Q8BHH8 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clrn3Q8BHH8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Clrn3Q8BHH8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clrn3Q8BHH8 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Clrn3Q8BHH8 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
Clrn3Q8BHH8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clrn3Q8BHH8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clrn3Q8BHH8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clrn3Q8BHH8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clrn3Q8BHH8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clrn3Q8BHH8 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.7■□□□□ 0.42
Clrn3Q8BHH8 Gm40848-201ENSMUST00000221998 324 ntBASIC17.7■□□□□ 0.42
Clrn3Q8BHH8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clrn3Q8BHH8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clrn3Q8BHH8 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.69■□□□□ 0.42
Clrn3Q8BHH8 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Clrn3Q8BHH8 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clrn3Q8BHH8 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Clrn3Q8BHH8 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clrn3Q8BHH8 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.69■□□□□ 0.42
Clrn3Q8BHH8 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.69■□□□□ 0.42
Clrn3Q8BHH8 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Clrn3Q8BHH8 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clrn3Q8BHH8 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clrn3Q8BHH8 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clrn3Q8BHH8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Clrn3Q8BHH8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clrn3Q8BHH8 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.68■□□□□ 0.42
Clrn3Q8BHH8 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.68■□□□□ 0.42
Clrn3Q8BHH8 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.68■□□□□ 0.42
Clrn3Q8BHH8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clrn3Q8BHH8 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clrn3Q8BHH8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Clrn3Q8BHH8 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Clrn3Q8BHH8 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Clrn3Q8BHH8 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn3Q8BHH8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn3Q8BHH8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn3Q8BHH8 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.67■□□□□ 0.42
Clrn3Q8BHH8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn3Q8BHH8 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn3Q8BHH8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn3Q8BHH8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn3Q8BHH8 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn3Q8BHH8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn3Q8BHH8 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn3Q8BHH8 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn3Q8BHH8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Clrn3Q8BHH8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn3Q8BHH8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn3Q8BHH8 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn3Q8BHH8 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn3Q8BHH8 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn3Q8BHH8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn3Q8BHH8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn3Q8BHH8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Clrn3Q8BHH8 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.67■□□□□ 0.42
Clrn3Q8BHH8 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Clrn3Q8BHH8 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Clrn3Q8BHH8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Clrn3Q8BHH8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clrn3Q8BHH8 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clrn3Q8BHH8 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Clrn3Q8BHH8 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
Clrn3Q8BHH8 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clrn3Q8BHH8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Clrn3Q8BHH8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Clrn3Q8BHH8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Clrn3Q8BHH8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms