Protein–RNA interactions for Protein: Q8BHD0

Rab39a, Ras-related protein Rab-39A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab39aQ8BHD0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rab39aQ8BHD0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rab39aQ8BHD0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Rab39aQ8BHD0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rab39aQ8BHD0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Rab39aQ8BHD0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.46■□□□□ 0.39
Rab39aQ8BHD0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rab39aQ8BHD0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rab39aQ8BHD0 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.46■□□□□ 0.38
Rab39aQ8BHD0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rab39aQ8BHD0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rab39aQ8BHD0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rab39aQ8BHD0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Rab39aQ8BHD0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rab39aQ8BHD0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rab39aQ8BHD0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rab39aQ8BHD0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rab39aQ8BHD0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Rab39aQ8BHD0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.45■□□□□ 0.38
Rab39aQ8BHD0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rab39aQ8BHD0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rab39aQ8BHD0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rab39aQ8BHD0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.45■□□□□ 0.38
Rab39aQ8BHD0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rab39aQ8BHD0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rab39aQ8BHD0 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.45■□□□□ 0.38
Rab39aQ8BHD0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Rab39aQ8BHD0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.45■□□□□ 0.38
Rab39aQ8BHD0 BC021767-201ENSMUST00000126387 1716 ntBASIC17.44■□□□□ 0.38
Rab39aQ8BHD0 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Rab39aQ8BHD0 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Rab39aQ8BHD0 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rab39aQ8BHD0 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.44■□□□□ 0.38
Rab39aQ8BHD0 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.44■□□□□ 0.38
Rab39aQ8BHD0 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.44■□□□□ 0.38
Rab39aQ8BHD0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Rab39aQ8BHD0 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rab39aQ8BHD0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rab39aQ8BHD0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Rab39aQ8BHD0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab39aQ8BHD0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab39aQ8BHD0 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rab39aQ8BHD0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Rab39aQ8BHD0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab39aQ8BHD0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab39aQ8BHD0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Rab39aQ8BHD0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.43■□□□□ 0.38
Rab39aQ8BHD0 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rab39aQ8BHD0 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.43■□□□□ 0.38
Rab39aQ8BHD0 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rab39aQ8BHD0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Rab39aQ8BHD0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab39aQ8BHD0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab39aQ8BHD0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab39aQ8BHD0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rab39aQ8BHD0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Rab39aQ8BHD0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rab39aQ8BHD0 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Rab39aQ8BHD0 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.42■□□□□ 0.38
Rab39aQ8BHD0 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.42■□□□□ 0.38
Rab39aQ8BHD0 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rab39aQ8BHD0 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.42■□□□□ 0.38
Rab39aQ8BHD0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Rab39aQ8BHD0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Rab39aQ8BHD0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rab39aQ8BHD0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rab39aQ8BHD0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rab39aQ8BHD0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab39aQ8BHD0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab39aQ8BHD0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab39aQ8BHD0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab39aQ8BHD0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab39aQ8BHD0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab39aQ8BHD0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab39aQ8BHD0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab39aQ8BHD0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rab39aQ8BHD0 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab39aQ8BHD0 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.41■□□□□ 0.38
Rab39aQ8BHD0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Rab39aQ8BHD0 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rab39aQ8BHD0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab39aQ8BHD0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab39aQ8BHD0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Rab39aQ8BHD0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Rab39aQ8BHD0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rab39aQ8BHD0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab39aQ8BHD0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab39aQ8BHD0 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab39aQ8BHD0 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rab39aQ8BHD0 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab39aQ8BHD0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Rab39aQ8BHD0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab39aQ8BHD0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Rab39aQ8BHD0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.4■□□□□ 0.38
Rab39aQ8BHD0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab39aQ8BHD0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rab39aQ8BHD0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Rab39aQ8BHD0 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.39■□□□□ 0.38
Rab39aQ8BHD0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab39aQ8BHD0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms