Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc5a7Q8BGY9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Slc5a7Q8BGY9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Slc5a7Q8BGY9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Slc5a7Q8BGY9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc5a7Q8BGY9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.63■□□□□ 0.25
Slc5a7Q8BGY9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc5a7Q8BGY9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc5a7Q8BGY9 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc5a7Q8BGY9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc5a7Q8BGY9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc5a7Q8BGY9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Slc5a7Q8BGY9 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc5a7Q8BGY9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc5a7Q8BGY9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc5a7Q8BGY9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc5a7Q8BGY9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Slc5a7Q8BGY9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc5a7Q8BGY9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.62■□□□□ 0.25
Slc5a7Q8BGY9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Slc5a7Q8BGY9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.62■□□□□ 0.25
Slc5a7Q8BGY9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc5a7Q8BGY9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc5a7Q8BGY9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc5a7Q8BGY9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.62■□□□□ 0.25
Slc5a7Q8BGY9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc5a7Q8BGY9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.62■□□□□ 0.25
Slc5a7Q8BGY9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Slc5a7Q8BGY9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc5a7Q8BGY9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Slc5a7Q8BGY9 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc5a7Q8BGY9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc5a7Q8BGY9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.61■□□□□ 0.25
Slc5a7Q8BGY9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc5a7Q8BGY9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc5a7Q8BGY9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
Slc5a7Q8BGY9 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.61■□□□□ 0.25
Slc5a7Q8BGY9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Slc5a7Q8BGY9 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Slc5a7Q8BGY9 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.61■□□□□ 0.25
Slc5a7Q8BGY9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc5a7Q8BGY9 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC16.61■□□□□ 0.25
Slc5a7Q8BGY9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.61■□□□□ 0.25
Slc5a7Q8BGY9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Slc5a7Q8BGY9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc5a7Q8BGY9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc5a7Q8BGY9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc5a7Q8BGY9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc5a7Q8BGY9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc5a7Q8BGY9 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc5a7Q8BGY9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc5a7Q8BGY9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Slc5a7Q8BGY9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Slc5a7Q8BGY9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc5a7Q8BGY9 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.6■□□□□ 0.25
Slc5a7Q8BGY9 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Slc5a7Q8BGY9 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc5a7Q8BGY9 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.6■□□□□ 0.25
Slc5a7Q8BGY9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc5a7Q8BGY9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc5a7Q8BGY9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc5a7Q8BGY9 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.6■□□□□ 0.25
Slc5a7Q8BGY9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc5a7Q8BGY9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Slc5a7Q8BGY9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Slc5a7Q8BGY9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Slc5a7Q8BGY9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc5a7Q8BGY9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc5a7Q8BGY9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc5a7Q8BGY9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc5a7Q8BGY9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc5a7Q8BGY9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc5a7Q8BGY9 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.59■□□□□ 0.25
Slc5a7Q8BGY9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Slc5a7Q8BGY9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Slc5a7Q8BGY9 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc5a7Q8BGY9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc5a7Q8BGY9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc5a7Q8BGY9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc5a7Q8BGY9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.59■□□□□ 0.25
Slc5a7Q8BGY9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Slc5a7Q8BGY9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Slc5a7Q8BGY9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Slc5a7Q8BGY9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Slc5a7Q8BGY9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Slc5a7Q8BGY9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Slc5a7Q8BGY9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc5a7Q8BGY9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc5a7Q8BGY9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Slc5a7Q8BGY9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.58■□□□□ 0.24
Slc5a7Q8BGY9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Slc5a7Q8BGY9 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.58■□□□□ 0.24
Slc5a7Q8BGY9 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Slc5a7Q8BGY9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Slc5a7Q8BGY9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Slc5a7Q8BGY9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Slc5a7Q8BGY9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Slc5a7Q8BGY9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc5a7Q8BGY9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc5a7Q8BGY9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms