Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim6Q8BGE7 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.1■□□□□ 0.81
Trim6Q8BGE7 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim6Q8BGE7 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim6Q8BGE7 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Trim6Q8BGE7 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim6Q8BGE7 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trim6Q8BGE7 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Trim6Q8BGE7 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.1■□□□□ 0.81
Trim6Q8BGE7 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Trim6Q8BGE7 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim6Q8BGE7 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim6Q8BGE7 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim6Q8BGE7 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.09■□□□□ 0.81
Trim6Q8BGE7 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Trim6Q8BGE7 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.09■□□□□ 0.81
Trim6Q8BGE7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Trim6Q8BGE7 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.09■□□□□ 0.81
Trim6Q8BGE7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim6Q8BGE7 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim6Q8BGE7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim6Q8BGE7 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trim6Q8BGE7 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim6Q8BGE7 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Trim6Q8BGE7 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim6Q8BGE7 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim6Q8BGE7 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Trim6Q8BGE7 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim6Q8BGE7 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim6Q8BGE7 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Trim6Q8BGE7 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim6Q8BGE7 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
Trim6Q8BGE7 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim6Q8BGE7 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim6Q8BGE7 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim6Q8BGE7 BC021767-201ENSMUST00000126387 1716 ntBASIC20.07■□□□□ 0.8
Trim6Q8BGE7 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim6Q8BGE7 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
Trim6Q8BGE7 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.07■□□□□ 0.8
Trim6Q8BGE7 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.07■□□□□ 0.8
Trim6Q8BGE7 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.07■□□□□ 0.8
Trim6Q8BGE7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trim6Q8BGE7 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.07■□□□□ 0.8
Trim6Q8BGE7 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim6Q8BGE7 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Trim6Q8BGE7 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trim6Q8BGE7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Trim6Q8BGE7 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim6Q8BGE7 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim6Q8BGE7 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim6Q8BGE7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.06■□□□□ 0.8
Trim6Q8BGE7 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Trim6Q8BGE7 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Trim6Q8BGE7 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim6Q8BGE7 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim6Q8BGE7 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.05■□□□□ 0.8
Trim6Q8BGE7 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim6Q8BGE7 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim6Q8BGE7 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim6Q8BGE7 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim6Q8BGE7 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim6Q8BGE7 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim6Q8BGE7 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim6Q8BGE7 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim6Q8BGE7 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Trim6Q8BGE7 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim6Q8BGE7 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim6Q8BGE7 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim6Q8BGE7 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim6Q8BGE7 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim6Q8BGE7 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
Trim6Q8BGE7 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Trim6Q8BGE7 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim6Q8BGE7 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim6Q8BGE7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim6Q8BGE7 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim6Q8BGE7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim6Q8BGE7 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim6Q8BGE7 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.03■□□□□ 0.8
Trim6Q8BGE7 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim6Q8BGE7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim6Q8BGE7 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim6Q8BGE7 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Trim6Q8BGE7 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Trim6Q8BGE7 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim6Q8BGE7 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim6Q8BGE7 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Trim6Q8BGE7 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim6Q8BGE7 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim6Q8BGE7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Trim6Q8BGE7 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trim6Q8BGE7 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim6Q8BGE7 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trim6Q8BGE7 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim6Q8BGE7 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim6Q8BGE7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim6Q8BGE7 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim6Q8BGE7 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trim6Q8BGE7 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim6Q8BGE7 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms