Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ubp1Q811S7 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.66■□□□□ 0.58
Ubp1Q811S7 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ubp1Q811S7 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ubp1Q811S7 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ubp1Q811S7 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ubp1Q811S7 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ubp1Q811S7 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ubp1Q811S7 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ubp1Q811S7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ubp1Q811S7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ubp1Q811S7 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ubp1Q811S7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.65■□□□□ 0.58
Ubp1Q811S7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Ubp1Q811S7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ubp1Q811S7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ubp1Q811S7 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ubp1Q811S7 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ubp1Q811S7 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ubp1Q811S7 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ubp1Q811S7 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ubp1Q811S7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ubp1Q811S7 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.64■□□□□ 0.57
Ubp1Q811S7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ubp1Q811S7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.64■□□□□ 0.57
Ubp1Q811S7 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ubp1Q811S7 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ubp1Q811S7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ubp1Q811S7 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.64■□□□□ 0.57
Ubp1Q811S7 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ubp1Q811S7 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ubp1Q811S7 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ubp1Q811S7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ubp1Q811S7 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ubp1Q811S7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ubp1Q811S7 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ubp1Q811S7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Ubp1Q811S7 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ubp1Q811S7 Gm13234-201ENSMUST00000120010 747 ntBASIC18.63■□□□□ 0.57
Ubp1Q811S7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ubp1Q811S7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ubp1Q811S7 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ubp1Q811S7 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ubp1Q811S7 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ubp1Q811S7 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.63■□□□□ 0.57
Ubp1Q811S7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubp1Q811S7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.62■□□□□ 0.57
Ubp1Q811S7 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ubp1Q811S7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.62■□□□□ 0.57
Ubp1Q811S7 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ubp1Q811S7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.62■□□□□ 0.57
Ubp1Q811S7 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubp1Q811S7 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubp1Q811S7 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.62■□□□□ 0.57
Ubp1Q811S7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.62■□□□□ 0.57
Ubp1Q811S7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ubp1Q811S7 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubp1Q811S7 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ubp1Q811S7 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubp1Q811S7 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ubp1Q811S7 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ubp1Q811S7 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ubp1Q811S7 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Ubp1Q811S7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Ubp1Q811S7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ubp1Q811S7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ubp1Q811S7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
Ubp1Q811S7 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ubp1Q811S7 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
Ubp1Q811S7 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ubp1Q811S7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.61■□□□□ 0.57
Ubp1Q811S7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.61■□□□□ 0.57
Ubp1Q811S7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.61■□□□□ 0.57
Ubp1Q811S7 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ubp1Q811S7 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ubp1Q811S7 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ubp1Q811S7 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Ubp1Q811S7 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ubp1Q811S7 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ubp1Q811S7 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.6■□□□□ 0.57
Ubp1Q811S7 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ubp1Q811S7 Gm18671-201ENSMUST00000214826 683 ntBASIC18.6■□□□□ 0.57
Ubp1Q811S7 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ubp1Q811S7 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.6■□□□□ 0.57
Ubp1Q811S7 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ubp1Q811S7 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ubp1Q811S7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ubp1Q811S7 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ubp1Q811S7 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Ubp1Q811S7 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ubp1Q811S7 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ubp1Q811S7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Ubp1Q811S7 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ubp1Q811S7 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.58■□□□□ 0.57
Ubp1Q811S7 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Ubp1Q811S7 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ubp1Q811S7 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Ubp1Q811S7 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ubp1Q811S7 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ubp1Q811S7 Gm26571-201ENSMUST00000181399 666 ntBASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms