Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Atpaf1Q811I0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Atpaf1Q811I0 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Atpaf1Q811I0 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Atpaf1Q811I0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Atpaf1Q811I0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Atpaf1Q811I0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Atpaf1Q811I0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.5■□□□□ 0.07
Atpaf1Q811I0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Atpaf1Q811I0 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Atpaf1Q811I0 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Atpaf1Q811I0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Atpaf1Q811I0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Atpaf1Q811I0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Atpaf1Q811I0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Atpaf1Q811I0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Atpaf1Q811I0 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Atpaf1Q811I0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.5■□□□□ 0.07
Atpaf1Q811I0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Atpaf1Q811I0 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atpaf1Q811I0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atpaf1Q811I0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atpaf1Q811I0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atpaf1Q811I0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atpaf1Q811I0 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.49■□□□□ 0.07
Atpaf1Q811I0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
Atpaf1Q811I0 Gm27502-201ENSMUST00000183495 199 ntBASIC15.49■□□□□ 0.07
Atpaf1Q811I0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Atpaf1Q811I0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atpaf1Q811I0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atpaf1Q811I0 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atpaf1Q811I0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atpaf1Q811I0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atpaf1Q811I0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atpaf1Q811I0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atpaf1Q811I0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Atpaf1Q811I0 Gm7332-201ENSMUST00000118351 454 ntBASIC15.48■□□□□ 0.07
Atpaf1Q811I0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atpaf1Q811I0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Atpaf1Q811I0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC15.48■□□□□ 0.07
Atpaf1Q811I0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Atpaf1Q811I0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atpaf1Q811I0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atpaf1Q811I0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atpaf1Q811I0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atpaf1Q811I0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atpaf1Q811I0 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atpaf1Q811I0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atpaf1Q811I0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atpaf1Q811I0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atpaf1Q811I0 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Atpaf1Q811I0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.47■□□□□ 0.07
Atpaf1Q811I0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atpaf1Q811I0 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Atpaf1Q811I0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atpaf1Q811I0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Atpaf1Q811I0 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.47■□□□□ 0.07
Atpaf1Q811I0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atpaf1Q811I0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atpaf1Q811I0 AA386476-201ENSMUST00000098781 1665 ntBASIC15.47■□□□□ 0.07
Atpaf1Q811I0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Atpaf1Q811I0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Atpaf1Q811I0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atpaf1Q811I0 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atpaf1Q811I0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atpaf1Q811I0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atpaf1Q811I0 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Atpaf1Q811I0 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atpaf1Q811I0 Gm10620-201ENSMUST00000098379 1332 ntBASIC15.46■□□□□ 0.07
Atpaf1Q811I0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atpaf1Q811I0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atpaf1Q811I0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Atpaf1Q811I0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atpaf1Q811I0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atpaf1Q811I0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atpaf1Q811I0 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
Atpaf1Q811I0 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.46■□□□□ 0.07
Atpaf1Q811I0 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Atpaf1Q811I0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Atpaf1Q811I0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atpaf1Q811I0 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.45■□□□□ 0.06
Atpaf1Q811I0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atpaf1Q811I0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atpaf1Q811I0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atpaf1Q811I0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Atpaf1Q811I0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atpaf1Q811I0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atpaf1Q811I0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atpaf1Q811I0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Atpaf1Q811I0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atpaf1Q811I0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atpaf1Q811I0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Atpaf1Q811I0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Atpaf1Q811I0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Atpaf1Q811I0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.45■□□□□ 0.06
Atpaf1Q811I0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atpaf1Q811I0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Atpaf1Q811I0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atpaf1Q811I0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atpaf1Q811I0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms