Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trnp1Q80ZI1 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trnp1Q80ZI1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trnp1Q80ZI1 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trnp1Q80ZI1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trnp1Q80ZI1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trnp1Q80ZI1 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Trnp1Q80ZI1 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC21.61■■□□□ 1.05
Trnp1Q80ZI1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trnp1Q80ZI1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trnp1Q80ZI1 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trnp1Q80ZI1 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
Trnp1Q80ZI1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trnp1Q80ZI1 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trnp1Q80ZI1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trnp1Q80ZI1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.6■■□□□ 1.05
Trnp1Q80ZI1 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trnp1Q80ZI1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Trnp1Q80ZI1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trnp1Q80ZI1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trnp1Q80ZI1 Mir5122-201ENSMUST00000175004 89 ntBASIC21.6■■□□□ 1.05
Trnp1Q80ZI1 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC21.6■■□□□ 1.05
Trnp1Q80ZI1 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC21.6■■□□□ 1.05
Trnp1Q80ZI1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Trnp1Q80ZI1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trnp1Q80ZI1 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Trnp1Q80ZI1 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Trnp1Q80ZI1 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Trnp1Q80ZI1 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.59■■□□□ 1.05
Trnp1Q80ZI1 Gm20472-201ENSMUST00000174403 1240 ntBASIC21.59■■□□□ 1.05
Trnp1Q80ZI1 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trnp1Q80ZI1 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trnp1Q80ZI1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trnp1Q80ZI1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
Trnp1Q80ZI1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trnp1Q80ZI1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trnp1Q80ZI1 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Trnp1Q80ZI1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trnp1Q80ZI1 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC21.58■■□□□ 1.05
Trnp1Q80ZI1 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trnp1Q80ZI1 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trnp1Q80ZI1 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trnp1Q80ZI1 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trnp1Q80ZI1 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trnp1Q80ZI1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Trnp1Q80ZI1 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trnp1Q80ZI1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Trnp1Q80ZI1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trnp1Q80ZI1 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.57■■□□□ 1.04
Trnp1Q80ZI1 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Trnp1Q80ZI1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC21.57■■□□□ 1.04
Trnp1Q80ZI1 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC21.57■■□□□ 1.04
Trnp1Q80ZI1 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Trnp1Q80ZI1 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trnp1Q80ZI1 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trnp1Q80ZI1 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trnp1Q80ZI1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trnp1Q80ZI1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trnp1Q80ZI1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trnp1Q80ZI1 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC21.56■■□□□ 1.04
Trnp1Q80ZI1 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC21.56■■□□□ 1.04
Trnp1Q80ZI1 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trnp1Q80ZI1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trnp1Q80ZI1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trnp1Q80ZI1 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trnp1Q80ZI1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trnp1Q80ZI1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trnp1Q80ZI1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
Trnp1Q80ZI1 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Trnp1Q80ZI1 Gm6433-201ENSMUST00000118634 875 ntBASIC21.55■■□□□ 1.04
Trnp1Q80ZI1 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC21.55■■□□□ 1.04
Trnp1Q80ZI1 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC21.55■■□□□ 1.04
Trnp1Q80ZI1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC21.55■■□□□ 1.04
Trnp1Q80ZI1 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trnp1Q80ZI1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trnp1Q80ZI1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.55■■□□□ 1.04
Trnp1Q80ZI1 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trnp1Q80ZI1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trnp1Q80ZI1 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.54■■□□□ 1.04
Trnp1Q80ZI1 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trnp1Q80ZI1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trnp1Q80ZI1 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
Trnp1Q80ZI1 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trnp1Q80ZI1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Trnp1Q80ZI1 Gm10231-201ENSMUST00000181584 441 ntBASIC21.54■■□□□ 1.04
Trnp1Q80ZI1 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trnp1Q80ZI1 Gm10175-202ENSMUST00000208752 441 ntBASIC21.54■■□□□ 1.04
Trnp1Q80ZI1 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trnp1Q80ZI1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.54■■□□□ 1.04
Trnp1Q80ZI1 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trnp1Q80ZI1 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.54■■□□□ 1.04
Trnp1Q80ZI1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Trnp1Q80ZI1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trnp1Q80ZI1 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC21.53■■□□□ 1.04
Trnp1Q80ZI1 AC140264.2-202ENSMUST00000218746 817 ntBASIC21.53■■□□□ 1.04
Trnp1Q80ZI1 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Trnp1Q80ZI1 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.53■■□□□ 1.04
Trnp1Q80ZI1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trnp1Q80ZI1 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trnp1Q80ZI1 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms