Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sh3tc2Q80VA5 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sh3tc2Q80VA5 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sh3tc2Q80VA5 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.67■□□□□ 0.9
Sh3tc2Q80VA5 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.67■□□□□ 0.9
Sh3tc2Q80VA5 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.67■□□□□ 0.9
Sh3tc2Q80VA5 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.67■□□□□ 0.9
Sh3tc2Q80VA5 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sh3tc2Q80VA5 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sh3tc2Q80VA5 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sh3tc2Q80VA5 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.66■□□□□ 0.9
Sh3tc2Q80VA5 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Sh3tc2Q80VA5 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.66■□□□□ 0.9
Sh3tc2Q80VA5 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.66■□□□□ 0.9
Sh3tc2Q80VA5 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.66■□□□□ 0.9
Sh3tc2Q80VA5 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sh3tc2Q80VA5 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sh3tc2Q80VA5 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sh3tc2Q80VA5 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sh3tc2Q80VA5 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sh3tc2Q80VA5 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sh3tc2Q80VA5 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sh3tc2Q80VA5 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sh3tc2Q80VA5 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sh3tc2Q80VA5 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.65■□□□□ 0.9
Sh3tc2Q80VA5 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Sh3tc2Q80VA5 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sh3tc2Q80VA5 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Sh3tc2Q80VA5 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Sh3tc2Q80VA5 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sh3tc2Q80VA5 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sh3tc2Q80VA5 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sh3tc2Q80VA5 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Sh3tc2Q80VA5 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.64■□□□□ 0.89
Sh3tc2Q80VA5 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.64■□□□□ 0.89
Sh3tc2Q80VA5 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sh3tc2Q80VA5 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Sh3tc2Q80VA5 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh3tc2Q80VA5 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sh3tc2Q80VA5 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Sh3tc2Q80VA5 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh3tc2Q80VA5 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.63■□□□□ 0.89
Sh3tc2Q80VA5 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh3tc2Q80VA5 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh3tc2Q80VA5 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh3tc2Q80VA5 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh3tc2Q80VA5 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Sh3tc2Q80VA5 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sh3tc2Q80VA5 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh3tc2Q80VA5 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sh3tc2Q80VA5 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sh3tc2Q80VA5 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sh3tc2Q80VA5 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sh3tc2Q80VA5 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Sh3tc2Q80VA5 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Sh3tc2Q80VA5 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Sh3tc2Q80VA5 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sh3tc2Q80VA5 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sh3tc2Q80VA5 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Sh3tc2Q80VA5 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sh3tc2Q80VA5 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sh3tc2Q80VA5 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Sh3tc2Q80VA5 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Sh3tc2Q80VA5 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sh3tc2Q80VA5 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.61■□□□□ 0.89
Sh3tc2Q80VA5 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sh3tc2Q80VA5 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.6■□□□□ 0.89
Sh3tc2Q80VA5 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sh3tc2Q80VA5 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh3tc2Q80VA5 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sh3tc2Q80VA5 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh3tc2Q80VA5 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh3tc2Q80VA5 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Sh3tc2Q80VA5 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh3tc2Q80VA5 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh3tc2Q80VA5 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh3tc2Q80VA5 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh3tc2Q80VA5 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh3tc2Q80VA5 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Sh3tc2Q80VA5 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh3tc2Q80VA5 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
Sh3tc2Q80VA5 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sh3tc2Q80VA5 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.59■□□□□ 0.89
Sh3tc2Q80VA5 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sh3tc2Q80VA5 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh3tc2Q80VA5 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Sh3tc2Q80VA5 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh3tc2Q80VA5 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sh3tc2Q80VA5 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sh3tc2Q80VA5 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sh3tc2Q80VA5 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sh3tc2Q80VA5 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sh3tc2Q80VA5 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Sh3tc2Q80VA5 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sh3tc2Q80VA5 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sh3tc2Q80VA5 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.58■□□□□ 0.89
Sh3tc2Q80VA5 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.58■□□□□ 0.89
Sh3tc2Q80VA5 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sh3tc2Q80VA5 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sh3tc2Q80VA5 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms