Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Usp8Q80U87 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp8Q80U87 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Usp8Q80U87 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Usp8Q80U87 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Usp8Q80U87 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp8Q80U87 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp8Q80U87 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp8Q80U87 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp8Q80U87 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp8Q80U87 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp8Q80U87 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Usp8Q80U87 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp8Q80U87 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Usp8Q80U87 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp8Q80U87 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.91■□□□□ 0.62
Usp8Q80U87 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp8Q80U87 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Usp8Q80U87 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.91■□□□□ 0.62
Usp8Q80U87 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp8Q80U87 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Usp8Q80U87 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Usp8Q80U87 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp8Q80U87 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp8Q80U87 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp8Q80U87 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.9■□□□□ 0.62
Usp8Q80U87 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Usp8Q80U87 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp8Q80U87 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Usp8Q80U87 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.9■□□□□ 0.62
Usp8Q80U87 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp8Q80U87 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Usp8Q80U87 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Usp8Q80U87 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Usp8Q80U87 Gm12251-201ENSMUST00000117893 792 ntBASIC18.9■□□□□ 0.62
Usp8Q80U87 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Usp8Q80U87 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Usp8Q80U87 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp8Q80U87 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp8Q80U87 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Usp8Q80U87 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Usp8Q80U87 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Usp8Q80U87 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.89■□□□□ 0.62
Usp8Q80U87 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.89■□□□□ 0.62
Usp8Q80U87 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp8Q80U87 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp8Q80U87 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.89■□□□□ 0.61
Usp8Q80U87 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Usp8Q80U87 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp8Q80U87 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
Usp8Q80U87 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Usp8Q80U87 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.89■□□□□ 0.61
Usp8Q80U87 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
Usp8Q80U87 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp8Q80U87 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp8Q80U87 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.88■□□□□ 0.61
Usp8Q80U87 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp8Q80U87 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp8Q80U87 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Usp8Q80U87 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp8Q80U87 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.88■□□□□ 0.61
Usp8Q80U87 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.88■□□□□ 0.61
Usp8Q80U87 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Usp8Q80U87 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp8Q80U87 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp8Q80U87 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp8Q80U87 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp8Q80U87 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp8Q80U87 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp8Q80U87 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Usp8Q80U87 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp8Q80U87 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp8Q80U87 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp8Q80U87 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp8Q80U87 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Usp8Q80U87 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp8Q80U87 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.87■□□□□ 0.61
Usp8Q80U87 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp8Q80U87 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Usp8Q80U87 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp8Q80U87 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Usp8Q80U87 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Usp8Q80U87 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Usp8Q80U87 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Usp8Q80U87 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp8Q80U87 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp8Q80U87 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp8Q80U87 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp8Q80U87 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.86■□□□□ 0.61
Usp8Q80U87 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp8Q80U87 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.86■□□□□ 0.61
Usp8Q80U87 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp8Q80U87 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp8Q80U87 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp8Q80U87 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Usp8Q80U87 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Usp8Q80U87 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Usp8Q80U87 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp8Q80U87 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Usp8Q80U87 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms