Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.71■□□□□ 0.59
Pcdh8Q7TSK3 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.71■□□□□ 0.59
Pcdh8Q7TSK3 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.71■□□□□ 0.59
Pcdh8Q7TSK3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.71■□□□□ 0.59
Pcdh8Q7TSK3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh8Q7TSK3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Pcdh8Q7TSK3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.7■□□□□ 0.58
Pcdh8Q7TSK3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh8Q7TSK3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh8Q7TSK3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Pcdh8Q7TSK3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
Pcdh8Q7TSK3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh8Q7TSK3 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Pcdh8Q7TSK3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh8Q7TSK3 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh8Q7TSK3 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh8Q7TSK3 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Pcdh8Q7TSK3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh8Q7TSK3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Pcdh8Q7TSK3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Pcdh8Q7TSK3 Gm27011-201ENSMUST00000182352 972 ntBASIC18.69■□□□□ 0.58
Pcdh8Q7TSK3 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Pcdh8Q7TSK3 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.69■□□□□ 0.58
Pcdh8Q7TSK3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Pcdh8Q7TSK3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh8Q7TSK3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh8Q7TSK3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh8Q7TSK3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.68■□□□□ 0.58
Pcdh8Q7TSK3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh8Q7TSK3 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh8Q7TSK3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh8Q7TSK3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh8Q7TSK3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.68■□□□□ 0.58
Pcdh8Q7TSK3 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh8Q7TSK3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh8Q7TSK3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.67■□□□□ 0.58
Pcdh8Q7TSK3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.67■□□□□ 0.58
Pcdh8Q7TSK3 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.67■□□□□ 0.58
Pcdh8Q7TSK3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.67■□□□□ 0.58
Pcdh8Q7TSK3 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh8Q7TSK3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh8Q7TSK3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.67■□□□□ 0.58
Pcdh8Q7TSK3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh8Q7TSK3 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Pcdh8Q7TSK3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh8Q7TSK3 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh8Q7TSK3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh8Q7TSK3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pcdh8Q7TSK3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh8Q7TSK3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.66■□□□□ 0.58
Pcdh8Q7TSK3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.66■□□□□ 0.58
Pcdh8Q7TSK3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh8Q7TSK3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh8Q7TSK3 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh8Q7TSK3 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh8Q7TSK3 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.66■□□□□ 0.58
Pcdh8Q7TSK3 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh8Q7TSK3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh8Q7TSK3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Pcdh8Q7TSK3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh8Q7TSK3 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Pcdh8Q7TSK3 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Pcdh8Q7TSK3 Gm6420-201ENSMUST00000193885 723 ntBASIC18.65■□□□□ 0.58
Pcdh8Q7TSK3 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh8Q7TSK3 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh8Q7TSK3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Pcdh8Q7TSK3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh8Q7TSK3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh8Q7TSK3 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh8Q7TSK3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh8Q7TSK3 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Pcdh8Q7TSK3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdh8Q7TSK3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdh8Q7TSK3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdh8Q7TSK3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh8Q7TSK3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh8Q7TSK3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.64■□□□□ 0.57
Pcdh8Q7TSK3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh8Q7TSK3 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.64■□□□□ 0.57
Pcdh8Q7TSK3 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.64■□□□□ 0.57
Pcdh8Q7TSK3 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.64■□□□□ 0.57
Pcdh8Q7TSK3 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh8Q7TSK3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh8Q7TSK3 Gm6365-201ENSMUST00000054711 744 ntBASIC18.64■□□□□ 0.57
Pcdh8Q7TSK3 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.64■□□□□ 0.57
Pcdh8Q7TSK3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh8Q7TSK3 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh8Q7TSK3 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh8Q7TSK3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Pcdh8Q7TSK3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Pcdh8Q7TSK3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh8Q7TSK3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh8Q7TSK3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh8Q7TSK3 Nespas-201ENSMUST00000143738 1083 ntBASIC18.63■□□□□ 0.57
Pcdh8Q7TSK3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.63■□□□□ 0.57
Pcdh8Q7TSK3 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh8Q7TSK3 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh8Q7TSK3 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh8Q7TSK3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh8Q7TSK3 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms