Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn4bQ7M729 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn4bQ7M729 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn4bQ7M729 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn4bQ7M729 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn4bQ7M729 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn4bQ7M729 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn4bQ7M729 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn4bQ7M729 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn4bQ7M729 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.45■□□□□ 0.54
Scn4bQ7M729 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Scn4bQ7M729 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Scn4bQ7M729 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.45■□□□□ 0.54
Scn4bQ7M729 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.45■□□□□ 0.54
Scn4bQ7M729 Gm43060-201ENSMUST00000200621 289 ntBASIC18.45■□□□□ 0.54
Scn4bQ7M729 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn4bQ7M729 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn4bQ7M729 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn4bQ7M729 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Scn4bQ7M729 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Scn4bQ7M729 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.45■□□□□ 0.54
Scn4bQ7M729 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn4bQ7M729 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Scn4bQ7M729 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.45■□□□□ 0.54
Scn4bQ7M729 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn4bQ7M729 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.44■□□□□ 0.54
Scn4bQ7M729 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn4bQ7M729 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Scn4bQ7M729 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn4bQ7M729 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn4bQ7M729 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn4bQ7M729 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.44■□□□□ 0.54
Scn4bQ7M729 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn4bQ7M729 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Scn4bQ7M729 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn4bQ7M729 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.43■□□□□ 0.54
Scn4bQ7M729 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.43■□□□□ 0.54
Scn4bQ7M729 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Scn4bQ7M729 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn4bQ7M729 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn4bQ7M729 Gm7860-201ENSMUST00000121190 879 ntBASIC18.43■□□□□ 0.54
Scn4bQ7M729 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn4bQ7M729 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn4bQ7M729 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Scn4bQ7M729 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn4bQ7M729 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn4bQ7M729 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn4bQ7M729 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Scn4bQ7M729 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn4bQ7M729 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Scn4bQ7M729 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.42■□□□□ 0.54
Scn4bQ7M729 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.42■□□□□ 0.54
Scn4bQ7M729 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn4bQ7M729 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn4bQ7M729 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn4bQ7M729 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn4bQ7M729 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn4bQ7M729 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Scn4bQ7M729 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.42■□□□□ 0.54
Scn4bQ7M729 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Scn4bQ7M729 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn4bQ7M729 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn4bQ7M729 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn4bQ7M729 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.41■□□□□ 0.54
Scn4bQ7M729 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Scn4bQ7M729 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn4bQ7M729 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Scn4bQ7M729 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Scn4bQ7M729 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn4bQ7M729 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Scn4bQ7M729 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Scn4bQ7M729 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Scn4bQ7M729 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Scn4bQ7M729 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scn4bQ7M729 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn4bQ7M729 Gm15039-201ENSMUST00000118914 875 ntBASIC18.4■□□□□ 0.54
Scn4bQ7M729 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scn4bQ7M729 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.4■□□□□ 0.54
Scn4bQ7M729 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.4■□□□□ 0.54
Scn4bQ7M729 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scn4bQ7M729 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scn4bQ7M729 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn4bQ7M729 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn4bQ7M729 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scn4bQ7M729 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Scn4bQ7M729 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Scn4bQ7M729 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Scn4bQ7M729 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Scn4bQ7M729 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.39■□□□□ 0.54
Scn4bQ7M729 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Scn4bQ7M729 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Scn4bQ7M729 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scn4bQ7M729 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Scn4bQ7M729 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Scn4bQ7M729 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.39■□□□□ 0.53
Scn4bQ7M729 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Scn4bQ7M729 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.39■□□□□ 0.53
Scn4bQ7M729 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Scn4bQ7M729 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
Scn4bQ7M729 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms