Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Cspg5Q71M36 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cspg5Q71M36 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cspg5Q71M36 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cspg5Q71M36 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cspg5Q71M36 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cspg5Q71M36 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cspg5Q71M36 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cspg5Q71M36 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Cspg5Q71M36 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cspg5Q71M36 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cspg5Q71M36 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cspg5Q71M36 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.57■□□□□ 0.72
Cspg5Q71M36 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
Cspg5Q71M36 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cspg5Q71M36 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cspg5Q71M36 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cspg5Q71M36 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cspg5Q71M36 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cspg5Q71M36 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cspg5Q71M36 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cspg5Q71M36 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Cspg5Q71M36 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.56■□□□□ 0.72
Cspg5Q71M36 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.56■□□□□ 0.72
Cspg5Q71M36 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cspg5Q71M36 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cspg5Q71M36 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cspg5Q71M36 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cspg5Q71M36 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cspg5Q71M36 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cspg5Q71M36 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cspg5Q71M36 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cspg5Q71M36 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.56■□□□□ 0.72
Cspg5Q71M36 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Cspg5Q71M36 Gm13148-201ENSMUST00000118892 745 ntBASIC19.55■□□□□ 0.72
Cspg5Q71M36 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cspg5Q71M36 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Cspg5Q71M36 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cspg5Q71M36 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cspg5Q71M36 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cspg5Q71M36 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cspg5Q71M36 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cspg5Q71M36 Gm13168-201ENSMUST00000121771 632 ntBASIC19.54■□□□□ 0.72
Cspg5Q71M36 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cspg5Q71M36 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Cspg5Q71M36 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cspg5Q71M36 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cspg5Q71M36 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.54■□□□□ 0.72
Cspg5Q71M36 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cspg5Q71M36 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.54■□□□□ 0.72
Cspg5Q71M36 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cspg5Q71M36 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Cspg5Q71M36 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.53■□□□□ 0.72
Cspg5Q71M36 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cspg5Q71M36 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cspg5Q71M36 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cspg5Q71M36 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cspg5Q71M36 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cspg5Q71M36 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.53■□□□□ 0.72
Cspg5Q71M36 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.53■□□□□ 0.72
Cspg5Q71M36 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cspg5Q71M36 Gm8520-201ENSMUST00000186517 868 ntBASIC19.53■□□□□ 0.72
Cspg5Q71M36 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cspg5Q71M36 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cspg5Q71M36 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cspg5Q71M36 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Cspg5Q71M36 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Cspg5Q71M36 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cspg5Q71M36 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.52■□□□□ 0.72
Cspg5Q71M36 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
Cspg5Q71M36 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.52■□□□□ 0.71
Cspg5Q71M36 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cspg5Q71M36 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cspg5Q71M36 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Cspg5Q71M36 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cspg5Q71M36 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Cspg5Q71M36 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cspg5Q71M36 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cspg5Q71M36 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cspg5Q71M36 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cspg5Q71M36 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
Cspg5Q71M36 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Cspg5Q71M36 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Cspg5Q71M36 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Cspg5Q71M36 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cspg5Q71M36 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.51■□□□□ 0.71
Cspg5Q71M36 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cspg5Q71M36 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cspg5Q71M36 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cspg5Q71M36 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.5■□□□□ 0.71
Cspg5Q71M36 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Cspg5Q71M36 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.5■□□□□ 0.71
Cspg5Q71M36 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Cspg5Q71M36 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cspg5Q71M36 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Cspg5Q71M36 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cspg5Q71M36 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Cspg5Q71M36 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.49■□□□□ 0.71
Cspg5Q71M36 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cspg5Q71M36 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms