Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC21.86■■□□□ 1.09
Scn10aQ6QIY3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.86■■□□□ 1.09
Scn10aQ6QIY3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Scn10aQ6QIY3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC21.86■■□□□ 1.09
Scn10aQ6QIY3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Scn10aQ6QIY3 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Scn10aQ6QIY3 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Scn10aQ6QIY3 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Scn10aQ6QIY3 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Scn10aQ6QIY3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Scn10aQ6QIY3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Scn10aQ6QIY3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Scn10aQ6QIY3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Scn10aQ6QIY3 H2-K2-201ENSMUST00000174250 1049 ntBASIC21.85■■□□□ 1.09
Scn10aQ6QIY3 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Scn10aQ6QIY3 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Scn10aQ6QIY3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Scn10aQ6QIY3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Scn10aQ6QIY3 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scn10aQ6QIY3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scn10aQ6QIY3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Scn10aQ6QIY3 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scn10aQ6QIY3 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scn10aQ6QIY3 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Scn10aQ6QIY3 Gm20472-201ENSMUST00000174403 1240 ntBASIC21.84■■□□□ 1.09
Scn10aQ6QIY3 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC21.84■■□□□ 1.09
Scn10aQ6QIY3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Scn10aQ6QIY3 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Scn10aQ6QIY3 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Scn10aQ6QIY3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Scn10aQ6QIY3 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Scn10aQ6QIY3 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Scn10aQ6QIY3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Scn10aQ6QIY3 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.83■■□□□ 1.08
Scn10aQ6QIY3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.83■■□□□ 1.08
Scn10aQ6QIY3 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
Scn10aQ6QIY3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scn10aQ6QIY3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Scn10aQ6QIY3 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scn10aQ6QIY3 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Scn10aQ6QIY3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Scn10aQ6QIY3 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC21.82■■□□□ 1.08
Scn10aQ6QIY3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scn10aQ6QIY3 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.82■■□□□ 1.08
Scn10aQ6QIY3 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Scn10aQ6QIY3 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scn10aQ6QIY3 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scn10aQ6QIY3 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC21.81■■□□□ 1.08
Scn10aQ6QIY3 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Scn10aQ6QIY3 AC121577.1-201ENSMUST00000227302 707 ntBASIC21.81■■□□□ 1.08
Scn10aQ6QIY3 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.81■■□□□ 1.08
Scn10aQ6QIY3 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scn10aQ6QIY3 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scn10aQ6QIY3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scn10aQ6QIY3 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scn10aQ6QIY3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scn10aQ6QIY3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Scn10aQ6QIY3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Scn10aQ6QIY3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Scn10aQ6QIY3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC21.81■■□□□ 1.08
Scn10aQ6QIY3 Gm43799-201ENSMUST00000201845 579 ntBASIC21.81■■□□□ 1.08
Scn10aQ6QIY3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scn10aQ6QIY3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scn10aQ6QIY3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scn10aQ6QIY3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Scn10aQ6QIY3 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC21.8■■□□□ 1.08
Scn10aQ6QIY3 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC21.8■■□□□ 1.08
Scn10aQ6QIY3 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scn10aQ6QIY3 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Scn10aQ6QIY3 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scn10aQ6QIY3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scn10aQ6QIY3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.8■■□□□ 1.08
Scn10aQ6QIY3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scn10aQ6QIY3 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scn10aQ6QIY3 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scn10aQ6QIY3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scn10aQ6QIY3 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC21.79■■□□□ 1.08
Scn10aQ6QIY3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Scn10aQ6QIY3 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC21.79■■□□□ 1.08
Scn10aQ6QIY3 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scn10aQ6QIY3 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Scn10aQ6QIY3 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Scn10aQ6QIY3 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scn10aQ6QIY3 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scn10aQ6QIY3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scn10aQ6QIY3 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Scn10aQ6QIY3 Gm9987-201ENSMUST00000069768 567 ntBASIC21.78■■□□□ 1.08
Scn10aQ6QIY3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scn10aQ6QIY3 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scn10aQ6QIY3 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scn10aQ6QIY3 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scn10aQ6QIY3 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC21.78■■□□□ 1.08
Scn10aQ6QIY3 Gm11927-201ENSMUST00000118472 759 ntBASIC21.78■■□□□ 1.08
Scn10aQ6QIY3 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scn10aQ6QIY3 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scn10aQ6QIY3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Scn10aQ6QIY3 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scn10aQ6QIY3 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Scn10aQ6QIY3 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scn10aQ6QIY3 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms