Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rif1Q6PR54 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
Rif1Q6PR54 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rif1Q6PR54 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.04■□□□□ 0.16
Rif1Q6PR54 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rif1Q6PR54 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rif1Q6PR54 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.04■□□□□ 0.16
Rif1Q6PR54 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rif1Q6PR54 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rif1Q6PR54 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rif1Q6PR54 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rif1Q6PR54 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rif1Q6PR54 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rif1Q6PR54 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.04■□□□□ 0.16
Rif1Q6PR54 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.04■□□□□ 0.16
Rif1Q6PR54 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rif1Q6PR54 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.04■□□□□ 0.16
Rif1Q6PR54 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rif1Q6PR54 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.04■□□□□ 0.16
Rif1Q6PR54 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rif1Q6PR54 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rif1Q6PR54 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rif1Q6PR54 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rif1Q6PR54 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Rif1Q6PR54 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rif1Q6PR54 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rif1Q6PR54 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rif1Q6PR54 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rif1Q6PR54 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rif1Q6PR54 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rif1Q6PR54 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Rif1Q6PR54 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rif1Q6PR54 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rif1Q6PR54 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rif1Q6PR54 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.03■□□□□ 0.16
Rif1Q6PR54 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rif1Q6PR54 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Rif1Q6PR54 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rif1Q6PR54 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rif1Q6PR54 Gm6623-201ENSMUST00000173570 544 ntBASIC16.02■□□□□ 0.16
Rif1Q6PR54 Gm7063-201ENSMUST00000186840 981 ntBASIC16.02■□□□□ 0.16
Rif1Q6PR54 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rif1Q6PR54 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Rif1Q6PR54 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Rif1Q6PR54 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rif1Q6PR54 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.02■□□□□ 0.15
Rif1Q6PR54 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Rif1Q6PR54 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rif1Q6PR54 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rif1Q6PR54 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rif1Q6PR54 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rif1Q6PR54 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.01■□□□□ 0.15
Rif1Q6PR54 Gm12382-201ENSMUST00000122005 922 ntBASIC16.01■□□□□ 0.15
Rif1Q6PR54 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Rif1Q6PR54 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rif1Q6PR54 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rif1Q6PR54 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rif1Q6PR54 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rif1Q6PR54 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rif1Q6PR54 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rif1Q6PR54 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
Rif1Q6PR54 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
Rif1Q6PR54 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
Rif1Q6PR54 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rif1Q6PR54 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16■□□□□ 0.15
Rif1Q6PR54 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC16■□□□□ 0.15
Rif1Q6PR54 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.99■□□□□ 0.15
Rif1Q6PR54 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rif1Q6PR54 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rif1Q6PR54 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rif1Q6PR54 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rif1Q6PR54 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.99■□□□□ 0.15
Rif1Q6PR54 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Rif1Q6PR54 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rif1Q6PR54 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rif1Q6PR54 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rif1Q6PR54 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rif1Q6PR54 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rif1Q6PR54 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Rif1Q6PR54 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Rif1Q6PR54 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.98■□□□□ 0.15
Rif1Q6PR54 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.98■□□□□ 0.15
Rif1Q6PR54 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rif1Q6PR54 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.98■□□□□ 0.15
Rif1Q6PR54 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rif1Q6PR54 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rif1Q6PR54 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Rif1Q6PR54 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rif1Q6PR54 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.98■□□□□ 0.15
Rif1Q6PR54 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC15.98■□□□□ 0.15
Rif1Q6PR54 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rif1Q6PR54 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
Rif1Q6PR54 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.98■□□□□ 0.15
Rif1Q6PR54 Gm45058-201ENSMUST00000205810 766 ntBASIC15.98■□□□□ 0.15
Rif1Q6PR54 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC15.98■□□□□ 0.15
Rif1Q6PR54 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Rif1Q6PR54 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rif1Q6PR54 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rif1Q6PR54 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Rif1Q6PR54 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms