Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.71■□□□□ 0.59
Scaf4Q6PFF0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scaf4Q6PFF0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.71■□□□□ 0.59
Scaf4Q6PFF0 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.71■□□□□ 0.59
Scaf4Q6PFF0 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.71■□□□□ 0.59
Scaf4Q6PFF0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scaf4Q6PFF0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scaf4Q6PFF0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scaf4Q6PFF0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Scaf4Q6PFF0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scaf4Q6PFF0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scaf4Q6PFF0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.7■□□□□ 0.58
Scaf4Q6PFF0 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scaf4Q6PFF0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scaf4Q6PFF0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scaf4Q6PFF0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Scaf4Q6PFF0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scaf4Q6PFF0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.69■□□□□ 0.58
Scaf4Q6PFF0 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
Scaf4Q6PFF0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.69■□□□□ 0.58
Scaf4Q6PFF0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scaf4Q6PFF0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scaf4Q6PFF0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scaf4Q6PFF0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scaf4Q6PFF0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scaf4Q6PFF0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.69■□□□□ 0.58
Scaf4Q6PFF0 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.69■□□□□ 0.58
Scaf4Q6PFF0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scaf4Q6PFF0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scaf4Q6PFF0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scaf4Q6PFF0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scaf4Q6PFF0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scaf4Q6PFF0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scaf4Q6PFF0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scaf4Q6PFF0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scaf4Q6PFF0 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scaf4Q6PFF0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scaf4Q6PFF0 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.68■□□□□ 0.58
Scaf4Q6PFF0 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.68■□□□□ 0.58
Scaf4Q6PFF0 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scaf4Q6PFF0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scaf4Q6PFF0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scaf4Q6PFF0 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Scaf4Q6PFF0 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
Scaf4Q6PFF0 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scaf4Q6PFF0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scaf4Q6PFF0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scaf4Q6PFF0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.67■□□□□ 0.58
Scaf4Q6PFF0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scaf4Q6PFF0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scaf4Q6PFF0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Scaf4Q6PFF0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scaf4Q6PFF0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.67■□□□□ 0.58
Scaf4Q6PFF0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Scaf4Q6PFF0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scaf4Q6PFF0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scaf4Q6PFF0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scaf4Q6PFF0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Scaf4Q6PFF0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scaf4Q6PFF0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scaf4Q6PFF0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Scaf4Q6PFF0 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scaf4Q6PFF0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scaf4Q6PFF0 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scaf4Q6PFF0 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scaf4Q6PFF0 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scaf4Q6PFF0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scaf4Q6PFF0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scaf4Q6PFF0 Gm5812-201ENSMUST00000061073 957 ntBASIC18.66■□□□□ 0.58
Scaf4Q6PFF0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scaf4Q6PFF0 Gm9959-201ENSMUST00000068277 390 ntBASIC18.66■□□□□ 0.58
Scaf4Q6PFF0 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scaf4Q6PFF0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scaf4Q6PFF0 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.66■□□□□ 0.58
Scaf4Q6PFF0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.66■□□□□ 0.58
Scaf4Q6PFF0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scaf4Q6PFF0 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Scaf4Q6PFF0 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.66■□□□□ 0.58
Scaf4Q6PFF0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scaf4Q6PFF0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.65■□□□□ 0.58
Scaf4Q6PFF0 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.65■□□□□ 0.58
Scaf4Q6PFF0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scaf4Q6PFF0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scaf4Q6PFF0 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scaf4Q6PFF0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scaf4Q6PFF0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scaf4Q6PFF0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
Scaf4Q6PFF0 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.65■□□□□ 0.58
Scaf4Q6PFF0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scaf4Q6PFF0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Scaf4Q6PFF0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scaf4Q6PFF0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scaf4Q6PFF0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scaf4Q6PFF0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scaf4Q6PFF0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Scaf4Q6PFF0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
Scaf4Q6PFF0 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Scaf4Q6PFF0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Scaf4Q6PFF0 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Scaf4Q6PFF0 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms