Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc46a1Q6PEM8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc46a1Q6PEM8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc46a1Q6PEM8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc46a1Q6PEM8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Slc46a1Q6PEM8 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.65■□□□□ 0.26
Slc46a1Q6PEM8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc46a1Q6PEM8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc46a1Q6PEM8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Slc46a1Q6PEM8 Mir5133-201ENSMUST00000174955 77 ntBASIC16.65■□□□□ 0.26
Slc46a1Q6PEM8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Slc46a1Q6PEM8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc46a1Q6PEM8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc46a1Q6PEM8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.65■□□□□ 0.26
Slc46a1Q6PEM8 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc46a1Q6PEM8 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc46a1Q6PEM8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc46a1Q6PEM8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc46a1Q6PEM8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc46a1Q6PEM8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc46a1Q6PEM8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Slc46a1Q6PEM8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc46a1Q6PEM8 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc46a1Q6PEM8 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Slc46a1Q6PEM8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.64■□□□□ 0.25
Slc46a1Q6PEM8 Golph3-202ENSMUST00000226517 2359 ntBASIC16.64■□□□□ 0.25
Slc46a1Q6PEM8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc46a1Q6PEM8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.63■□□□□ 0.25
Slc46a1Q6PEM8 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc46a1Q6PEM8 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc46a1Q6PEM8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc46a1Q6PEM8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc46a1Q6PEM8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Slc46a1Q6PEM8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Slc46a1Q6PEM8 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Slc46a1Q6PEM8 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Slc46a1Q6PEM8 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.63■□□□□ 0.25
Slc46a1Q6PEM8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc46a1Q6PEM8 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Slc46a1Q6PEM8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Slc46a1Q6PEM8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc46a1Q6PEM8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc46a1Q6PEM8 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Slc46a1Q6PEM8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc46a1Q6PEM8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc46a1Q6PEM8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc46a1Q6PEM8 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Slc46a1Q6PEM8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Slc46a1Q6PEM8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc46a1Q6PEM8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc46a1Q6PEM8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.62■□□□□ 0.25
Slc46a1Q6PEM8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.62■□□□□ 0.25
Slc46a1Q6PEM8 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Slc46a1Q6PEM8 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Slc46a1Q6PEM8 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.62■□□□□ 0.25
Slc46a1Q6PEM8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc46a1Q6PEM8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc46a1Q6PEM8 Iqck-206ENSMUST00000208658 2891 ntBASIC16.62■□□□□ 0.25
Slc46a1Q6PEM8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Slc46a1Q6PEM8 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc46a1Q6PEM8 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc46a1Q6PEM8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc46a1Q6PEM8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Slc46a1Q6PEM8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc46a1Q6PEM8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc46a1Q6PEM8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc46a1Q6PEM8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Slc46a1Q6PEM8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc46a1Q6PEM8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Slc46a1Q6PEM8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.61■□□□□ 0.25
Slc46a1Q6PEM8 Nespas-201ENSMUST00000143738 1083 ntBASIC16.61■□□□□ 0.25
Slc46a1Q6PEM8 Gm6420-201ENSMUST00000193885 723 ntBASIC16.61■□□□□ 0.25
Slc46a1Q6PEM8 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.61■□□□□ 0.25
Slc46a1Q6PEM8 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc46a1Q6PEM8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc46a1Q6PEM8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc46a1Q6PEM8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc46a1Q6PEM8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Slc46a1Q6PEM8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc46a1Q6PEM8 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.6■□□□□ 0.25
Slc46a1Q6PEM8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Slc46a1Q6PEM8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.6■□□□□ 0.25
Slc46a1Q6PEM8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.6■□□□□ 0.25
Slc46a1Q6PEM8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Slc46a1Q6PEM8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.6■□□□□ 0.25
Slc46a1Q6PEM8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Slc46a1Q6PEM8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc46a1Q6PEM8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Slc46a1Q6PEM8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc46a1Q6PEM8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
Slc46a1Q6PEM8 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc46a1Q6PEM8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc46a1Q6PEM8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Slc46a1Q6PEM8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.59■□□□□ 0.25
Slc46a1Q6PEM8 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc46a1Q6PEM8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.59■□□□□ 0.25
Slc46a1Q6PEM8 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.59■□□□□ 0.25
Slc46a1Q6PEM8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc46a1Q6PEM8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc46a1Q6PEM8 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms