Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.81■□□□□ 0.92
ShbQ6PD21 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
ShbQ6PD21 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ShbQ6PD21 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ShbQ6PD21 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ShbQ6PD21 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.81■□□□□ 0.92
ShbQ6PD21 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ShbQ6PD21 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ShbQ6PD21 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.8■□□□□ 0.92
ShbQ6PD21 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
ShbQ6PD21 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.8■□□□□ 0.92
ShbQ6PD21 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.8■□□□□ 0.92
ShbQ6PD21 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ShbQ6PD21 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
ShbQ6PD21 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ShbQ6PD21 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ShbQ6PD21 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ShbQ6PD21 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ShbQ6PD21 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ShbQ6PD21 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ShbQ6PD21 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ShbQ6PD21 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ShbQ6PD21 Gm11927-201ENSMUST00000118472 759 ntBASIC20.79■□□□□ 0.92
ShbQ6PD21 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ShbQ6PD21 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ShbQ6PD21 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ShbQ6PD21 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
ShbQ6PD21 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
ShbQ6PD21 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
ShbQ6PD21 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ShbQ6PD21 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ShbQ6PD21 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ShbQ6PD21 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ShbQ6PD21 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ShbQ6PD21 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ShbQ6PD21 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ShbQ6PD21 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
ShbQ6PD21 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.78■□□□□ 0.92
ShbQ6PD21 Gm30025-201ENSMUST00000218555 728 ntBASIC20.78■□□□□ 0.92
ShbQ6PD21 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ShbQ6PD21 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ShbQ6PD21 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ShbQ6PD21 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ShbQ6PD21 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ShbQ6PD21 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ShbQ6PD21 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ShbQ6PD21 Gm13559-201ENSMUST00000120476 863 ntBASIC20.77■□□□□ 0.92
ShbQ6PD21 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ShbQ6PD21 Gm27741-201ENSMUST00000185060 237 ntBASIC20.77■□□□□ 0.92
ShbQ6PD21 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ShbQ6PD21 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.77■□□□□ 0.92
ShbQ6PD21 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ShbQ6PD21 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.77■□□□□ 0.92
ShbQ6PD21 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
ShbQ6PD21 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
ShbQ6PD21 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.77■□□□□ 0.91
ShbQ6PD21 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ShbQ6PD21 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
ShbQ6PD21 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ShbQ6PD21 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ShbQ6PD21 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ShbQ6PD21 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.76■□□□□ 0.91
ShbQ6PD21 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ShbQ6PD21 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ShbQ6PD21 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
ShbQ6PD21 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ShbQ6PD21 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ShbQ6PD21 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ShbQ6PD21 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ShbQ6PD21 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ShbQ6PD21 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.75■□□□□ 0.91
ShbQ6PD21 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.75■□□□□ 0.91
ShbQ6PD21 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ShbQ6PD21 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.75■□□□□ 0.91
ShbQ6PD21 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ShbQ6PD21 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ShbQ6PD21 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ShbQ6PD21 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.74■□□□□ 0.91
ShbQ6PD21 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ShbQ6PD21 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ShbQ6PD21 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ShbQ6PD21 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ShbQ6PD21 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ShbQ6PD21 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ShbQ6PD21 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ShbQ6PD21 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
ShbQ6PD21 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
ShbQ6PD21 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ShbQ6PD21 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ShbQ6PD21 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.73■□□□□ 0.91
ShbQ6PD21 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.73■□□□□ 0.91
ShbQ6PD21 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.73■□□□□ 0.91
ShbQ6PD21 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ShbQ6PD21 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ShbQ6PD21 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.72■□□□□ 0.91
ShbQ6PD21 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.72■□□□□ 0.91
ShbQ6PD21 Gm11539-201ENSMUST00000119837 557 ntBASIC20.72■□□□□ 0.91
ShbQ6PD21 Gm13436-201ENSMUST00000120418 567 ntBASIC20.72■□□□□ 0.91
ShbQ6PD21 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ShbQ6PD21 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms