Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Abcf1Q6P542 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Abcf1Q6P542 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Abcf1Q6P542 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Abcf1Q6P542 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Abcf1Q6P542 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
Abcf1Q6P542 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Abcf1Q6P542 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Abcf1Q6P542 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC21.16■□□□□ 0.98
Abcf1Q6P542 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Abcf1Q6P542 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Abcf1Q6P542 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Abcf1Q6P542 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.16■□□□□ 0.98
Abcf1Q6P542 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.16■□□□□ 0.98
Abcf1Q6P542 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.16■□□□□ 0.98
Abcf1Q6P542 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Abcf1Q6P542 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Abcf1Q6P542 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Abcf1Q6P542 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Abcf1Q6P542 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Abcf1Q6P542 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Abcf1Q6P542 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Abcf1Q6P542 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC21.15■□□□□ 0.98
Abcf1Q6P542 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC21.15■□□□□ 0.98
Abcf1Q6P542 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Abcf1Q6P542 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Abcf1Q6P542 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Abcf1Q6P542 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Abcf1Q6P542 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
Abcf1Q6P542 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Abcf1Q6P542 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Abcf1Q6P542 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Abcf1Q6P542 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Abcf1Q6P542 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.15■□□□□ 0.98
Abcf1Q6P542 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Abcf1Q6P542 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Abcf1Q6P542 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Abcf1Q6P542 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Abcf1Q6P542 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Abcf1Q6P542 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Abcf1Q6P542 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Abcf1Q6P542 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Abcf1Q6P542 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Abcf1Q6P542 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC21.13■□□□□ 0.97
Abcf1Q6P542 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.13■□□□□ 0.97
Abcf1Q6P542 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Abcf1Q6P542 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Abcf1Q6P542 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.13■□□□□ 0.97
Abcf1Q6P542 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Abcf1Q6P542 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Abcf1Q6P542 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Abcf1Q6P542 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Abcf1Q6P542 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Abcf1Q6P542 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Abcf1Q6P542 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Abcf1Q6P542 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Abcf1Q6P542 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Abcf1Q6P542 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Abcf1Q6P542 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Abcf1Q6P542 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Abcf1Q6P542 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Abcf1Q6P542 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Abcf1Q6P542 Gm35558-201ENSMUST00000222675 2219 ntBASIC21.11■□□□□ 0.97
Abcf1Q6P542 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.11■□□□□ 0.97
Abcf1Q6P542 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Abcf1Q6P542 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.11■□□□□ 0.97
Abcf1Q6P542 Gm8493-201ENSMUST00000196881 489 ntBASIC21.11■□□□□ 0.97
Abcf1Q6P542 Gm6139-201ENSMUST00000079261 882 ntBASIC21.11■□□□□ 0.97
Abcf1Q6P542 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Abcf1Q6P542 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Abcf1Q6P542 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Abcf1Q6P542 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Abcf1Q6P542 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Abcf1Q6P542 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Abcf1Q6P542 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC21.1■□□□□ 0.97
Abcf1Q6P542 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Abcf1Q6P542 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Abcf1Q6P542 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Abcf1Q6P542 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Abcf1Q6P542 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.1■□□□□ 0.97
Abcf1Q6P542 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Abcf1Q6P542 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.1■□□□□ 0.97
Abcf1Q6P542 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Abcf1Q6P542 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Abcf1Q6P542 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.1■□□□□ 0.97
Abcf1Q6P542 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC21.1■□□□□ 0.97
Abcf1Q6P542 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Abcf1Q6P542 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Abcf1Q6P542 Fam105a-203ENSMUST00000226170 3043 ntBASIC21.1■□□□□ 0.97
Abcf1Q6P542 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Abcf1Q6P542 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Abcf1Q6P542 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Abcf1Q6P542 Gm38342-201ENSMUST00000195710 2980 ntBASIC21.09■□□□□ 0.97
Abcf1Q6P542 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Abcf1Q6P542 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Abcf1Q6P542 Gm37352-201ENSMUST00000193908 2181 ntBASIC21.09■□□□□ 0.97
Abcf1Q6P542 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Abcf1Q6P542 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Abcf1Q6P542 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Abcf1Q6P542 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms