Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Retreg2Q6NS82 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Retreg2Q6NS82 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retreg2Q6NS82 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Retreg2Q6NS82 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.34■□□□□ 0.85
Retreg2Q6NS82 AV356131-201ENSMUST00000206201 750 ntBASIC20.34■□□□□ 0.85
Retreg2Q6NS82 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retreg2Q6NS82 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retreg2Q6NS82 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retreg2Q6NS82 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retreg2Q6NS82 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retreg2Q6NS82 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Retreg2Q6NS82 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retreg2Q6NS82 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retreg2Q6NS82 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.33■□□□□ 0.84
Retreg2Q6NS82 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retreg2Q6NS82 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retreg2Q6NS82 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retreg2Q6NS82 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retreg2Q6NS82 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retreg2Q6NS82 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retreg2Q6NS82 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retreg2Q6NS82 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retreg2Q6NS82 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retreg2Q6NS82 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.32■□□□□ 0.84
Retreg2Q6NS82 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.32■□□□□ 0.84
Retreg2Q6NS82 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retreg2Q6NS82 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Retreg2Q6NS82 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Retreg2Q6NS82 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.32■□□□□ 0.84
Retreg2Q6NS82 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retreg2Q6NS82 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Retreg2Q6NS82 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retreg2Q6NS82 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retreg2Q6NS82 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Retreg2Q6NS82 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retreg2Q6NS82 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retreg2Q6NS82 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.31■□□□□ 0.84
Retreg2Q6NS82 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retreg2Q6NS82 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Retreg2Q6NS82 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retreg2Q6NS82 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Retreg2Q6NS82 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retreg2Q6NS82 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Retreg2Q6NS82 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Retreg2Q6NS82 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.31■□□□□ 0.84
Retreg2Q6NS82 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Retreg2Q6NS82 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retreg2Q6NS82 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Retreg2Q6NS82 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Retreg2Q6NS82 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retreg2Q6NS82 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retreg2Q6NS82 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retreg2Q6NS82 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Retreg2Q6NS82 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retreg2Q6NS82 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retreg2Q6NS82 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.3■□□□□ 0.84
Retreg2Q6NS82 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
Retreg2Q6NS82 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retreg2Q6NS82 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retreg2Q6NS82 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Retreg2Q6NS82 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Retreg2Q6NS82 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retreg2Q6NS82 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retreg2Q6NS82 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retreg2Q6NS82 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Retreg2Q6NS82 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retreg2Q6NS82 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retreg2Q6NS82 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retreg2Q6NS82 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retreg2Q6NS82 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retreg2Q6NS82 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retreg2Q6NS82 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Retreg2Q6NS82 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Retreg2Q6NS82 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retreg2Q6NS82 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.29■□□□□ 0.84
Retreg2Q6NS82 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.29■□□□□ 0.84
Retreg2Q6NS82 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retreg2Q6NS82 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Retreg2Q6NS82 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.28■□□□□ 0.84
Retreg2Q6NS82 Reep4-203ENSMUST00000226563 1444 ntBASIC20.28■□□□□ 0.84
Retreg2Q6NS82 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retreg2Q6NS82 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retreg2Q6NS82 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Retreg2Q6NS82 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retreg2Q6NS82 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retreg2Q6NS82 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retreg2Q6NS82 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retreg2Q6NS82 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retreg2Q6NS82 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retreg2Q6NS82 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.27■□□□□ 0.84
Retreg2Q6NS82 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retreg2Q6NS82 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.27■□□□□ 0.84
Retreg2Q6NS82 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retreg2Q6NS82 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retreg2Q6NS82 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retreg2Q6NS82 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Retreg2Q6NS82 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.27■□□□□ 0.84
Retreg2Q6NS82 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retreg2Q6NS82 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms