Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Col11a2Q64739 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Col11a2Q64739 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC23.39■■□□□ 1.34
Col11a2Q64739 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Col11a2Q64739 Wnt10b-205ENSMUST00000226846 1204 ntBASIC23.39■■□□□ 1.33
Col11a2Q64739 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Col11a2Q64739 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Col11a2Q64739 Gm8668-201ENSMUST00000120559 1447 ntBASIC23.38■■□□□ 1.33
Col11a2Q64739 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Col11a2Q64739 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Col11a2Q64739 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Col11a2Q64739 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Col11a2Q64739 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Col11a2Q64739 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Col11a2Q64739 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Col11a2Q64739 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Col11a2Q64739 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Col11a2Q64739 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC23.37■■□□□ 1.33
Col11a2Q64739 Gm19094-201ENSMUST00000209791 1246 ntBASIC23.37■■□□□ 1.33
Col11a2Q64739 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Col11a2Q64739 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
Col11a2Q64739 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
Col11a2Q64739 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC23.37■■□□□ 1.33
Col11a2Q64739 Gm20100-201ENSMUST00000209418 2272 ntBASIC23.37■■□□□ 1.33
Col11a2Q64739 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Col11a2Q64739 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
Col11a2Q64739 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC23.37■■□□□ 1.33
Col11a2Q64739 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col11a2Q64739 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Col11a2Q64739 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col11a2Q64739 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC23.36■■□□□ 1.33
Col11a2Q64739 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Col11a2Q64739 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col11a2Q64739 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Col11a2Q64739 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Col11a2Q64739 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Col11a2Q64739 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Col11a2Q64739 AC152827.1-201ENSMUST00000221143 2189 ntBASIC23.35■■□□□ 1.33
Col11a2Q64739 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Col11a2Q64739 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Col11a2Q64739 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Col11a2Q64739 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Col11a2Q64739 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Col11a2Q64739 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Col11a2Q64739 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC23.35■■□□□ 1.33
Col11a2Q64739 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Col11a2Q64739 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Col11a2Q64739 Gm6433-201ENSMUST00000118634 875 ntBASIC23.34■■□□□ 1.33
Col11a2Q64739 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Col11a2Q64739 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Col11a2Q64739 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC23.34■■□□□ 1.33
Col11a2Q64739 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Col11a2Q64739 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Col11a2Q64739 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Col11a2Q64739 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Col11a2Q64739 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Col11a2Q64739 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC23.33■■□□□ 1.33
Col11a2Q64739 Gm11927-201ENSMUST00000118472 759 ntBASIC23.33■■□□□ 1.33
Col11a2Q64739 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Col11a2Q64739 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Col11a2Q64739 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Col11a2Q64739 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Col11a2Q64739 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Col11a2Q64739 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Col11a2Q64739 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
Col11a2Q64739 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Col11a2Q64739 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Col11a2Q64739 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Col11a2Q64739 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Col11a2Q64739 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Col11a2Q64739 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Col11a2Q64739 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Col11a2Q64739 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Col11a2Q64739 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC23.32■■□□□ 1.32
Col11a2Q64739 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Col11a2Q64739 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC23.32■■□□□ 1.32
Col11a2Q64739 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Col11a2Q64739 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Col11a2Q64739 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Col11a2Q64739 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
Col11a2Q64739 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Col11a2Q64739 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Col11a2Q64739 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Col11a2Q64739 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Col11a2Q64739 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Col11a2Q64739 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Col11a2Q64739 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC23.3■■□□□ 1.32
Col11a2Q64739 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Col11a2Q64739 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Col11a2Q64739 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Col11a2Q64739 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Col11a2Q64739 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Col11a2Q64739 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Col11a2Q64739 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Col11a2Q64739 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Col11a2Q64739 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Col11a2Q64739 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Col11a2Q64739 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Col11a2Q64739 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Col11a2Q64739 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms