Protein–RNA interactions for Protein: Q64287

Irf4, Interferon regulatory factor 4, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf4Q64287 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Irf4Q64287 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf4Q64287 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Irf4Q64287 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Irf4Q64287 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Irf4Q64287 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Irf4Q64287 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Irf4Q64287 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Irf4Q64287 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Irf4Q64287 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Irf4Q64287 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Irf4Q64287 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.64■□□□□ 0.57
Irf4Q64287 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Irf4Q64287 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.64■□□□□ 0.57
Irf4Q64287 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Irf4Q64287 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf4Q64287 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Irf4Q64287 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf4Q64287 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf4Q64287 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf4Q64287 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.63■□□□□ 0.57
Irf4Q64287 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Irf4Q64287 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.63■□□□□ 0.57
Irf4Q64287 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf4Q64287 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf4Q64287 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Irf4Q64287 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Irf4Q64287 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Irf4Q64287 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Irf4Q64287 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.62■□□□□ 0.57
Irf4Q64287 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.62■□□□□ 0.57
Irf4Q64287 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.62■□□□□ 0.57
Irf4Q64287 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.62■□□□□ 0.57
Irf4Q64287 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Irf4Q64287 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Irf4Q64287 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Irf4Q64287 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Irf4Q64287 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Irf4Q64287 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Irf4Q64287 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
Irf4Q64287 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Irf4Q64287 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Irf4Q64287 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Irf4Q64287 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Irf4Q64287 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Irf4Q64287 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Irf4Q64287 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Irf4Q64287 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Irf4Q64287 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Irf4Q64287 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Irf4Q64287 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Irf4Q64287 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Irf4Q64287 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Irf4Q64287 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Irf4Q64287 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Irf4Q64287 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Irf4Q64287 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Irf4Q64287 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.6■□□□□ 0.57
Irf4Q64287 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Irf4Q64287 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Irf4Q64287 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Irf4Q64287 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Irf4Q64287 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Irf4Q64287 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Irf4Q64287 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Irf4Q64287 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Irf4Q64287 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.59■□□□□ 0.57
Irf4Q64287 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Irf4Q64287 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf4Q64287 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.59■□□□□ 0.57
Irf4Q64287 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Irf4Q64287 Gm13148-201ENSMUST00000118892 745 ntBASIC18.59■□□□□ 0.57
Irf4Q64287 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf4Q64287 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Irf4Q64287 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf4Q64287 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf4Q64287 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Irf4Q64287 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.57
Irf4Q64287 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Irf4Q64287 Gm7290-201ENSMUST00000104990 617 ntBASIC18.58■□□□□ 0.56
Irf4Q64287 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Irf4Q64287 Gm12918-201ENSMUST00000120234 636 ntBASIC18.58■□□□□ 0.56
Irf4Q64287 Gm15710-201ENSMUST00000121821 636 ntBASIC18.58■□□□□ 0.56
Irf4Q64287 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.58■□□□□ 0.56
Irf4Q64287 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Irf4Q64287 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.58■□□□□ 0.56
Irf4Q64287 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.58■□□□□ 0.56
Irf4Q64287 Gm5075-201ENSMUST00000196916 622 ntBASIC18.58■□□□□ 0.56
Irf4Q64287 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Irf4Q64287 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Irf4Q64287 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.58■□□□□ 0.56
Irf4Q64287 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.58■□□□□ 0.56
Irf4Q64287 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Irf4Q64287 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Irf4Q64287 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Irf4Q64287 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Irf4Q64287 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Irf4Q64287 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Irf4Q64287 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Irf4Q64287 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms