Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col7a1Q63870 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col7a1Q63870 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col7a1Q63870 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col7a1Q63870 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col7a1Q63870 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.01■□□□□ 0.15
Col7a1Q63870 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col7a1Q63870 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col7a1Q63870 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col7a1Q63870 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.01■□□□□ 0.15
Col7a1Q63870 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col7a1Q63870 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col7a1Q63870 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16■□□□□ 0.15
Col7a1Q63870 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col7a1Q63870 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16■□□□□ 0.15
Col7a1Q63870 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col7a1Q63870 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Col7a1Q63870 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Col7a1Q63870 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col7a1Q63870 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col7a1Q63870 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Col7a1Q63870 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16■□□□□ 0.15
Col7a1Q63870 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16■□□□□ 0.15
Col7a1Q63870 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Col7a1Q63870 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col7a1Q63870 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col7a1Q63870 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC15.99■□□□□ 0.15
Col7a1Q63870 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col7a1Q63870 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col7a1Q63870 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col7a1Q63870 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Col7a1Q63870 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col7a1Q63870 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.99■□□□□ 0.15
Col7a1Q63870 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
Col7a1Q63870 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Col7a1Q63870 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.98■□□□□ 0.15
Col7a1Q63870 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col7a1Q63870 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col7a1Q63870 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col7a1Q63870 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col7a1Q63870 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col7a1Q63870 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col7a1Q63870 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.98■□□□□ 0.15
Col7a1Q63870 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col7a1Q63870 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col7a1Q63870 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col7a1Q63870 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col7a1Q63870 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col7a1Q63870 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col7a1Q63870 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col7a1Q63870 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col7a1Q63870 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col7a1Q63870 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.97■□□□□ 0.15
Col7a1Q63870 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.97■□□□□ 0.15
Col7a1Q63870 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col7a1Q63870 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col7a1Q63870 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col7a1Q63870 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col7a1Q63870 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.97■□□□□ 0.15
Col7a1Q63870 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col7a1Q63870 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col7a1Q63870 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
Col7a1Q63870 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col7a1Q63870 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Col7a1Q63870 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col7a1Q63870 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
Col7a1Q63870 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.96■□□□□ 0.15
Col7a1Q63870 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col7a1Q63870 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col7a1Q63870 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col7a1Q63870 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.96■□□□□ 0.15
Col7a1Q63870 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.96■□□□□ 0.15
Col7a1Q63870 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.96■□□□□ 0.15
Col7a1Q63870 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col7a1Q63870 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
Col7a1Q63870 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Col7a1Q63870 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col7a1Q63870 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC15.95■□□□□ 0.14
Col7a1Q63870 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col7a1Q63870 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col7a1Q63870 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col7a1Q63870 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col7a1Q63870 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col7a1Q63870 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col7a1Q63870 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col7a1Q63870 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col7a1Q63870 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.95■□□□□ 0.14
Col7a1Q63870 Timm23-208ENSMUST00000226683 750 ntBASIC15.95■□□□□ 0.14
Col7a1Q63870 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Col7a1Q63870 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col7a1Q63870 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Col7a1Q63870 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col7a1Q63870 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col7a1Q63870 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col7a1Q63870 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col7a1Q63870 Gm43514-201ENSMUST00000198852 424 ntBASIC15.94■□□□□ 0.14
Col7a1Q63870 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col7a1Q63870 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Col7a1Q63870 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Col7a1Q63870 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms