Protein–RNA interactions for Protein: Q62261

Sptbn1, Spectrin beta chain, non-erythrocytic 1, mousemouse

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn1Q62261 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Sptbn1Q62261 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Sptbn1Q62261 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sptbn1Q62261 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Sptbn1Q62261 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sptbn1Q62261 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Sptbn1Q62261 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sptbn1Q62261 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sptbn1Q62261 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC16.2■□□□□ 0.18
Sptbn1Q62261 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Sptbn1Q62261 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sptbn1Q62261 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sptbn1Q62261 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sptbn1Q62261 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Sptbn1Q62261 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC16.2■□□□□ 0.18
Sptbn1Q62261 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sptbn1Q62261 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sptbn1Q62261 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sptbn1Q62261 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.19■□□□□ 0.18
Sptbn1Q62261 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.19■□□□□ 0.18
Sptbn1Q62261 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sptbn1Q62261 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sptbn1Q62261 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.19■□□□□ 0.18
Sptbn1Q62261 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sptbn1Q62261 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sptbn1Q62261 Gm10698-201ENSMUST00000182663 604 ntBASIC16.19■□□□□ 0.18
Sptbn1Q62261 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sptbn1Q62261 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sptbn1Q62261 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.18■□□□□ 0.18
Sptbn1Q62261 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sptbn1Q62261 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sptbn1Q62261 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sptbn1Q62261 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sptbn1Q62261 Gm6659-201ENSMUST00000174752 547 ntBASIC16.18■□□□□ 0.18
Sptbn1Q62261 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Sptbn1Q62261 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Sptbn1Q62261 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sptbn1Q62261 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sptbn1Q62261 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Sptbn1Q62261 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Sptbn1Q62261 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.18■□□□□ 0.18
Sptbn1Q62261 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sptbn1Q62261 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sptbn1Q62261 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sptbn1Q62261 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sptbn1Q62261 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sptbn1Q62261 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sptbn1Q62261 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.18■□□□□ 0.18
Sptbn1Q62261 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Sptbn1Q62261 Gm32051-202ENSMUST00000197905 2385 ntBASIC16.17■□□□□ 0.18
Sptbn1Q62261 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sptbn1Q62261 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sptbn1Q62261 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sptbn1Q62261 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sptbn1Q62261 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.17■□□□□ 0.18
Sptbn1Q62261 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sptbn1Q62261 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sptbn1Q62261 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Sptbn1Q62261 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sptbn1Q62261 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.17■□□□□ 0.18
Sptbn1Q62261 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Sptbn1Q62261 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.16■□□□□ 0.18
Sptbn1Q62261 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Sptbn1Q62261 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.16■□□□□ 0.18
Sptbn1Q62261 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sptbn1Q62261 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sptbn1Q62261 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sptbn1Q62261 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.16■□□□□ 0.18
Sptbn1Q62261 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sptbn1Q62261 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sptbn1Q62261 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sptbn1Q62261 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sptbn1Q62261 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sptbn1Q62261 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sptbn1Q62261 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.16■□□□□ 0.18
Sptbn1Q62261 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.16■□□□□ 0.18
Sptbn1Q62261 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sptbn1Q62261 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sptbn1Q62261 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sptbn1Q62261 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.16■□□□□ 0.18
Sptbn1Q62261 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sptbn1Q62261 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sptbn1Q62261 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sptbn1Q62261 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Sptbn1Q62261 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sptbn1Q62261 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sptbn1Q62261 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.15■□□□□ 0.18
Sptbn1Q62261 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.15■□□□□ 0.18
Sptbn1Q62261 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sptbn1Q62261 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.15■□□□□ 0.18
Sptbn1Q62261 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.15■□□□□ 0.18
Sptbn1Q62261 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sptbn1Q62261 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sptbn1Q62261 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sptbn1Q62261 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sptbn1Q62261 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sptbn1Q62261 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sptbn1Q62261 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sptbn1Q62261 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.15■□□□□ 0.18
Sptbn1Q62261 Gm18101-201ENSMUST00000215769 548 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms