Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Scn9aQ62205 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Scn9aQ62205 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Scn9aQ62205 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Scn9aQ62205 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Scn9aQ62205 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Scn9aQ62205 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Scn9aQ62205 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Scn9aQ62205 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Scn9aQ62205 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC22.67■■□□□ 1.22
Scn9aQ62205 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC22.67■■□□□ 1.22
Scn9aQ62205 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Scn9aQ62205 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Scn9aQ62205 Gm10167-201ENSMUST00000150411 1479 ntBASIC22.67■■□□□ 1.22
Scn9aQ62205 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Scn9aQ62205 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC22.67■■□□□ 1.22
Scn9aQ62205 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Scn9aQ62205 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Scn9aQ62205 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Scn9aQ62205 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
Scn9aQ62205 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC22.66■■□□□ 1.22
Scn9aQ62205 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Scn9aQ62205 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Scn9aQ62205 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Scn9aQ62205 Gm20472-201ENSMUST00000174403 1240 ntBASIC22.65■■□□□ 1.22
Scn9aQ62205 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC22.65■■□□□ 1.22
Scn9aQ62205 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Scn9aQ62205 AC163280.1-201ENSMUST00000228194 1100 ntBASIC22.65■■□□□ 1.22
Scn9aQ62205 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Scn9aQ62205 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Scn9aQ62205 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Scn9aQ62205 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Scn9aQ62205 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC22.65■■□□□ 1.22
Scn9aQ62205 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Scn9aQ62205 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Scn9aQ62205 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Scn9aQ62205 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Scn9aQ62205 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Scn9aQ62205 Gm13158-201ENSMUST00000122007 736 ntBASIC22.64■■□□□ 1.21
Scn9aQ62205 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Scn9aQ62205 Gm26971-201ENSMUST00000182423 1072 ntBASIC22.64■■□□□ 1.21
Scn9aQ62205 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Scn9aQ62205 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Scn9aQ62205 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Scn9aQ62205 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Scn9aQ62205 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC22.63■■□□□ 1.21
Scn9aQ62205 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC22.63■■□□□ 1.21
Scn9aQ62205 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Scn9aQ62205 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Scn9aQ62205 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Scn9aQ62205 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Scn9aQ62205 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Scn9aQ62205 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC22.63■■□□□ 1.21
Scn9aQ62205 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC22.63■■□□□ 1.21
Scn9aQ62205 Gm43799-201ENSMUST00000201845 579 ntBASIC22.63■■□□□ 1.21
Scn9aQ62205 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC22.63■■□□□ 1.21
Scn9aQ62205 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Scn9aQ62205 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Scn9aQ62205 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Scn9aQ62205 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC22.63■■□□□ 1.21
Scn9aQ62205 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Scn9aQ62205 Gm10231-201ENSMUST00000181584 441 ntBASIC22.62■■□□□ 1.21
Scn9aQ62205 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Scn9aQ62205 Gm10175-202ENSMUST00000208752 441 ntBASIC22.62■■□□□ 1.21
Scn9aQ62205 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Scn9aQ62205 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Scn9aQ62205 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Scn9aQ62205 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Scn9aQ62205 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Scn9aQ62205 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Scn9aQ62205 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Scn9aQ62205 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Scn9aQ62205 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Scn9aQ62205 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scn9aQ62205 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC22.61■■□□□ 1.21
Scn9aQ62205 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scn9aQ62205 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Scn9aQ62205 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scn9aQ62205 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scn9aQ62205 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Scn9aQ62205 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scn9aQ62205 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scn9aQ62205 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scn9aQ62205 Gm15847-201ENSMUST00000121417 1065 ntBASIC22.61■■□□□ 1.21
Scn9aQ62205 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scn9aQ62205 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scn9aQ62205 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC22.6■■□□□ 1.21
Scn9aQ62205 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Scn9aQ62205 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC22.6■■□□□ 1.21
Scn9aQ62205 H2-K2-201ENSMUST00000174250 1049 ntBASIC22.6■■□□□ 1.21
Scn9aQ62205 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Scn9aQ62205 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Scn9aQ62205 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Scn9aQ62205 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Scn9aQ62205 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Scn9aQ62205 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC22.59■■□□□ 1.21
Scn9aQ62205 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC22.59■■□□□ 1.21
Scn9aQ62205 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Scn9aQ62205 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Scn9aQ62205 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC22.59■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms