Protein–RNA interactions for Protein: Q62167

Ddx3x, ATP-dependent RNA helicase DDX3X, mousemouse

Known RBP Predictions only

Length 662 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx3xQ62167 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx3xQ62167 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx3xQ62167 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.25■□□□□ 0.83
Ddx3xQ62167 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx3xQ62167 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx3xQ62167 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx3xQ62167 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx3xQ62167 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.24■□□□□ 0.83
Ddx3xQ62167 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.24■□□□□ 0.83
Ddx3xQ62167 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.24■□□□□ 0.83
Ddx3xQ62167 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx3xQ62167 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Ddx3xQ62167 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx3xQ62167 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx3xQ62167 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx3xQ62167 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Ddx3xQ62167 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Ddx3xQ62167 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.23■□□□□ 0.83
Ddx3xQ62167 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx3xQ62167 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx3xQ62167 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx3xQ62167 Rarb-207ENSMUST00000225921 2756 ntBASIC20.23■□□□□ 0.83
Ddx3xQ62167 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.23■□□□□ 0.83
Ddx3xQ62167 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx3xQ62167 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx3xQ62167 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx3xQ62167 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Ddx3xQ62167 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Ddx3xQ62167 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx3xQ62167 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx3xQ62167 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx3xQ62167 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Ddx3xQ62167 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx3xQ62167 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx3xQ62167 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx3xQ62167 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx3xQ62167 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.22■□□□□ 0.83
Ddx3xQ62167 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.22■□□□□ 0.83
Ddx3xQ62167 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx3xQ62167 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx3xQ62167 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx3xQ62167 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx3xQ62167 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx3xQ62167 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx3xQ62167 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx3xQ62167 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx3xQ62167 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx3xQ62167 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Ddx3xQ62167 Gm8493-201ENSMUST00000196881 489 ntBASIC20.21■□□□□ 0.83
Ddx3xQ62167 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.21■□□□□ 0.83
Ddx3xQ62167 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx3xQ62167 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx3xQ62167 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx3xQ62167 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx3xQ62167 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx3xQ62167 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx3xQ62167 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx3xQ62167 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx3xQ62167 Gm27454-201ENSMUST00000185090 204 ntBASIC20.2■□□□□ 0.82
Ddx3xQ62167 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.2■□□□□ 0.82
Ddx3xQ62167 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx3xQ62167 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx3xQ62167 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx3xQ62167 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx3xQ62167 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx3xQ62167 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx3xQ62167 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx3xQ62167 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx3xQ62167 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx3xQ62167 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Ddx3xQ62167 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Ddx3xQ62167 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx3xQ62167 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx3xQ62167 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx3xQ62167 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.19■□□□□ 0.82
Ddx3xQ62167 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx3xQ62167 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx3xQ62167 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx3xQ62167 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Ddx3xQ62167 Gm11421-201ENSMUST00000122124 294 ntBASIC20.18■□□□□ 0.82
Ddx3xQ62167 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx3xQ62167 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Ddx3xQ62167 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx3xQ62167 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx3xQ62167 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx3xQ62167 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx3xQ62167 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx3xQ62167 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx3xQ62167 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx3xQ62167 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx3xQ62167 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.17■□□□□ 0.82
Ddx3xQ62167 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx3xQ62167 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Ddx3xQ62167 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx3xQ62167 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx3xQ62167 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.17■□□□□ 0.82
Ddx3xQ62167 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx3xQ62167 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx3xQ62167 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx3xQ62167 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms