Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ecm1Q61508 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.15■□□□□ 0.98
Ecm1Q61508 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
Ecm1Q61508 AC158538.1-201ENSMUST00000225870 294 ntBASIC21.15■□□□□ 0.98
Ecm1Q61508 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ecm1Q61508 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ecm1Q61508 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ecm1Q61508 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ecm1Q61508 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Ecm1Q61508 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ecm1Q61508 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ecm1Q61508 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Ecm1Q61508 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ecm1Q61508 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ecm1Q61508 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ecm1Q61508 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ecm1Q61508 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
Ecm1Q61508 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC21.14■□□□□ 0.97
Ecm1Q61508 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ecm1Q61508 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Ecm1Q61508 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Ecm1Q61508 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ecm1Q61508 Gm21596-201ENSMUST00000178049 1316 ntBASIC21.13■□□□□ 0.97
Ecm1Q61508 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ecm1Q61508 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Ecm1Q61508 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ecm1Q61508 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC21.13■□□□□ 0.97
Ecm1Q61508 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ecm1Q61508 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ecm1Q61508 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC21.13■□□□□ 0.97
Ecm1Q61508 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC21.13■□□□□ 0.97
Ecm1Q61508 Gm19094-201ENSMUST00000209791 1246 ntBASIC21.13■□□□□ 0.97
Ecm1Q61508 Arhgef33-211ENSMUST00000225658 473 ntBASIC21.13■□□□□ 0.97
Ecm1Q61508 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ecm1Q61508 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ecm1Q61508 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ecm1Q61508 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ecm1Q61508 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ecm1Q61508 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ecm1Q61508 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ecm1Q61508 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
Ecm1Q61508 Gm6576-201ENSMUST00000169678 883 ntBASIC21.12■□□□□ 0.97
Ecm1Q61508 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.12■□□□□ 0.97
Ecm1Q61508 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
Ecm1Q61508 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ecm1Q61508 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ecm1Q61508 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ecm1Q61508 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ecm1Q61508 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.11■□□□□ 0.97
Ecm1Q61508 Gm18666-201ENSMUST00000190039 958 ntBASIC21.11■□□□□ 0.97
Ecm1Q61508 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ecm1Q61508 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC21.11■□□□□ 0.97
Ecm1Q61508 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ecm1Q61508 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ecm1Q61508 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ecm1Q61508 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ecm1Q61508 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ecm1Q61508 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC21.1■□□□□ 0.97
Ecm1Q61508 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ecm1Q61508 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
Ecm1Q61508 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Ecm1Q61508 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ecm1Q61508 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.1■□□□□ 0.97
Ecm1Q61508 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ecm1Q61508 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ecm1Q61508 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ecm1Q61508 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ecm1Q61508 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.09■□□□□ 0.97
Ecm1Q61508 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Ecm1Q61508 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ecm1Q61508 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC21.09■□□□□ 0.97
Ecm1Q61508 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ecm1Q61508 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ecm1Q61508 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC21.09■□□□□ 0.97
Ecm1Q61508 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ecm1Q61508 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ecm1Q61508 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ecm1Q61508 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ecm1Q61508 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ecm1Q61508 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ecm1Q61508 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ecm1Q61508 Gm2399-201ENSMUST00000104944 225 ntBASIC21.08■□□□□ 0.97
Ecm1Q61508 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ecm1Q61508 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ecm1Q61508 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ecm1Q61508 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ecm1Q61508 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ecm1Q61508 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ecm1Q61508 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.07■□□□□ 0.96
Ecm1Q61508 Nrn1-203ENSMUST00000223611 1443 ntBASIC21.07■□□□□ 0.96
Ecm1Q61508 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.07■□□□□ 0.96
Ecm1Q61508 Gm22325-201ENSMUST00000158904 308 ntBASIC21.07■□□□□ 0.96
Ecm1Q61508 Gm10698-201ENSMUST00000182663 604 ntBASIC21.07■□□□□ 0.96
Ecm1Q61508 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ecm1Q61508 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ecm1Q61508 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
Ecm1Q61508 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ecm1Q61508 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ecm1Q61508 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ecm1Q61508 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms