Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sox17Q61473 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox17Q61473 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sox17Q61473 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox17Q61473 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.79■□□□□ 0.44
Sox17Q61473 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sox17Q61473 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.79■□□□□ 0.44
Sox17Q61473 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sox17Q61473 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox17Q61473 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox17Q61473 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox17Q61473 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox17Q61473 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sox17Q61473 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox17Q61473 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sox17Q61473 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.78■□□□□ 0.44
Sox17Q61473 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox17Q61473 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox17Q61473 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox17Q61473 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sox17Q61473 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.77■□□□□ 0.44
Sox17Q61473 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox17Q61473 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox17Q61473 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.77■□□□□ 0.44
Sox17Q61473 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.77■□□□□ 0.44
Sox17Q61473 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox17Q61473 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox17Q61473 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sox17Q61473 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.77■□□□□ 0.43
Sox17Q61473 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Sox17Q61473 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Sox17Q61473 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox17Q61473 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.76■□□□□ 0.43
Sox17Q61473 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Sox17Q61473 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.76■□□□□ 0.43
Sox17Q61473 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox17Q61473 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sox17Q61473 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sox17Q61473 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sox17Q61473 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sox17Q61473 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Sox17Q61473 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Sox17Q61473 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sox17Q61473 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Sox17Q61473 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Sox17Q61473 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sox17Q61473 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.75■□□□□ 0.43
Sox17Q61473 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sox17Q61473 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sox17Q61473 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sox17Q61473 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Sox17Q61473 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sox17Q61473 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.74■□□□□ 0.43
Sox17Q61473 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sox17Q61473 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.74■□□□□ 0.43
Sox17Q61473 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sox17Q61473 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sox17Q61473 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sox17Q61473 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sox17Q61473 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.74■□□□□ 0.43
Sox17Q61473 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Sox17Q61473 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Sox17Q61473 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sox17Q61473 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sox17Q61473 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sox17Q61473 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.73■□□□□ 0.43
Sox17Q61473 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Sox17Q61473 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sox17Q61473 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sox17Q61473 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sox17Q61473 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sox17Q61473 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sox17Q61473 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sox17Q61473 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Sox17Q61473 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.72■□□□□ 0.43
Sox17Q61473 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox17Q61473 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox17Q61473 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox17Q61473 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox17Q61473 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Sox17Q61473 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox17Q61473 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox17Q61473 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.72■□□□□ 0.43
Sox17Q61473 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox17Q61473 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox17Q61473 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sox17Q61473 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Sox17Q61473 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.72■□□□□ 0.43
Sox17Q61473 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sox17Q61473 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox17Q61473 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox17Q61473 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox17Q61473 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Sox17Q61473 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sox17Q61473 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.72■□□□□ 0.43
Sox17Q61473 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox17Q61473 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sox17Q61473 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.71■□□□□ 0.43
Sox17Q61473 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.71■□□□□ 0.43
Sox17Q61473 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms