Protein–RNA interactions for Protein: Q61079

Sim2, Single-minded homolog 2, mousemouse

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim2Q61079 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sim2Q61079 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.56■□□□□ 0.56
Sim2Q61079 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sim2Q61079 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sim2Q61079 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Sim2Q61079 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.56■□□□□ 0.56
Sim2Q61079 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.56■□□□□ 0.56
Sim2Q61079 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.56■□□□□ 0.56
Sim2Q61079 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sim2Q61079 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.56■□□□□ 0.56
Sim2Q61079 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sim2Q61079 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Sim2Q61079 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sim2Q61079 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sim2Q61079 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sim2Q61079 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sim2Q61079 Mir1199-201ENSMUST00000117015 119 ntBASIC18.55■□□□□ 0.56
Sim2Q61079 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.55■□□□□ 0.56
Sim2Q61079 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Sim2Q61079 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Sim2Q61079 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Sim2Q61079 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.55■□□□□ 0.56
Sim2Q61079 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sim2Q61079 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sim2Q61079 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.55■□□□□ 0.56
Sim2Q61079 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
Sim2Q61079 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sim2Q61079 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sim2Q61079 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.54■□□□□ 0.56
Sim2Q61079 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Sim2Q61079 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.54■□□□□ 0.56
Sim2Q61079 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Sim2Q61079 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Sim2Q61079 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sim2Q61079 Gm44549-201ENSMUST00000208351 577 ntBASIC18.54■□□□□ 0.56
Sim2Q61079 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sim2Q61079 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sim2Q61079 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Sim2Q61079 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sim2Q61079 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Sim2Q61079 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sim2Q61079 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sim2Q61079 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Sim2Q61079 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.53■□□□□ 0.56
Sim2Q61079 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sim2Q61079 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Sim2Q61079 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.53■□□□□ 0.56
Sim2Q61079 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sim2Q61079 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.53■□□□□ 0.56
Sim2Q61079 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sim2Q61079 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sim2Q61079 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sim2Q61079 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sim2Q61079 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sim2Q61079 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sim2Q61079 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sim2Q61079 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.52■□□□□ 0.56
Sim2Q61079 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Sim2Q61079 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.52■□□□□ 0.56
Sim2Q61079 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sim2Q61079 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sim2Q61079 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sim2Q61079 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Sim2Q61079 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sim2Q61079 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sim2Q61079 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sim2Q61079 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.52■□□□□ 0.55
Sim2Q61079 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sim2Q61079 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sim2Q61079 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sim2Q61079 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Sim2Q61079 Gm2399-201ENSMUST00000104944 225 ntBASIC18.51■□□□□ 0.55
Sim2Q61079 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Sim2Q61079 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sim2Q61079 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sim2Q61079 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.51■□□□□ 0.55
Sim2Q61079 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sim2Q61079 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sim2Q61079 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sim2Q61079 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sim2Q61079 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.5■□□□□ 0.55
Sim2Q61079 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Sim2Q61079 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sim2Q61079 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sim2Q61079 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sim2Q61079 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sim2Q61079 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.5■□□□□ 0.55
Sim2Q61079 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.5■□□□□ 0.55
Sim2Q61079 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sim2Q61079 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.5■□□□□ 0.55
Sim2Q61079 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Sim2Q61079 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sim2Q61079 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sim2Q61079 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sim2Q61079 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.49■□□□□ 0.55
Sim2Q61079 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sim2Q61079 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sim2Q61079 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sim2Q61079 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sim2Q61079 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms