Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Satb1Q60611 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Satb1Q60611 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Satb1Q60611 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Satb1Q60611 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.56■□□□□ 0.72
Satb1Q60611 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Satb1Q60611 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.56■□□□□ 0.72
Satb1Q60611 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Satb1Q60611 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Satb1Q60611 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Satb1Q60611 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Satb1Q60611 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Satb1Q60611 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Satb1Q60611 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Satb1Q60611 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Satb1Q60611 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Satb1Q60611 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Satb1Q60611 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Satb1Q60611 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Satb1Q60611 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Satb1Q60611 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Satb1Q60611 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Satb1Q60611 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Satb1Q60611 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Satb1Q60611 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Satb1Q60611 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Satb1Q60611 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Satb1Q60611 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Satb1Q60611 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Satb1Q60611 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Satb1Q60611 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Satb1Q60611 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.53■□□□□ 0.72
Satb1Q60611 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.53■□□□□ 0.72
Satb1Q60611 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.53■□□□□ 0.72
Satb1Q60611 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.53■□□□□ 0.72
Satb1Q60611 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Satb1Q60611 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Satb1Q60611 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Satb1Q60611 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Satb1Q60611 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Satb1Q60611 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Satb1Q60611 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
Satb1Q60611 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Satb1Q60611 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Satb1Q60611 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Satb1Q60611 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Satb1Q60611 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Satb1Q60611 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Satb1Q60611 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Satb1Q60611 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
Satb1Q60611 Gm11643-201ENSMUST00000119578 864 ntBASIC19.52■□□□□ 0.72
Satb1Q60611 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.52■□□□□ 0.72
Satb1Q60611 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.52■□□□□ 0.72
Satb1Q60611 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.52■□□□□ 0.72
Satb1Q60611 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Satb1Q60611 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Satb1Q60611 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Satb1Q60611 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Satb1Q60611 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.51■□□□□ 0.71
Satb1Q60611 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Satb1Q60611 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Satb1Q60611 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
Satb1Q60611 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Satb1Q60611 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Satb1Q60611 Gm6420-201ENSMUST00000193885 723 ntBASIC19.51■□□□□ 0.71
Satb1Q60611 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.51■□□□□ 0.71
Satb1Q60611 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Satb1Q60611 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Satb1Q60611 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Satb1Q60611 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Satb1Q60611 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Satb1Q60611 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Satb1Q60611 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.51■□□□□ 0.71
Satb1Q60611 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Satb1Q60611 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Satb1Q60611 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Satb1Q60611 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Satb1Q60611 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Satb1Q60611 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Satb1Q60611 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Satb1Q60611 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.5■□□□□ 0.71
Satb1Q60611 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Satb1Q60611 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Satb1Q60611 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Satb1Q60611 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Satb1Q60611 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Satb1Q60611 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Satb1Q60611 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Satb1Q60611 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Satb1Q60611 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Satb1Q60611 Gm715-201ENSMUST00000117865 831 ntBASIC19.49■□□□□ 0.71
Satb1Q60611 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Satb1Q60611 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.49■□□□□ 0.71
Satb1Q60611 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Satb1Q60611 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Satb1Q60611 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Satb1Q60611 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Satb1Q60611 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Satb1Q60611 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Satb1Q60611 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms