Protein–RNA interactions for Protein: Q5YIR8

Clec4a4, C-type lectin domain family 4, member a4, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clec4a4Q5YIR8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clec4a4Q5YIR8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clec4a4Q5YIR8 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.59■□□□□ 0.57
Clec4a4Q5YIR8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.59■□□□□ 0.57
Clec4a4Q5YIR8 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clec4a4Q5YIR8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clec4a4Q5YIR8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clec4a4Q5YIR8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Clec4a4Q5YIR8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clec4a4Q5YIR8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clec4a4Q5YIR8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Clec4a4Q5YIR8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clec4a4Q5YIR8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clec4a4Q5YIR8 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clec4a4Q5YIR8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clec4a4Q5YIR8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clec4a4Q5YIR8 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clec4a4Q5YIR8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Clec4a4Q5YIR8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.58■□□□□ 0.57
Clec4a4Q5YIR8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Clec4a4Q5YIR8 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Clec4a4Q5YIR8 Gm13146-201ENSMUST00000118508 780 ntBASIC18.58■□□□□ 0.56
Clec4a4Q5YIR8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Clec4a4Q5YIR8 Gm22240-201ENSMUST00000175225 82 ntBASIC18.58■□□□□ 0.56
Clec4a4Q5YIR8 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.58■□□□□ 0.56
Clec4a4Q5YIR8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clec4a4Q5YIR8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clec4a4Q5YIR8 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.58■□□□□ 0.56
Clec4a4Q5YIR8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clec4a4Q5YIR8 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clec4a4Q5YIR8 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.57■□□□□ 0.56
Clec4a4Q5YIR8 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clec4a4Q5YIR8 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clec4a4Q5YIR8 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clec4a4Q5YIR8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Clec4a4Q5YIR8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Clec4a4Q5YIR8 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clec4a4Q5YIR8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Clec4a4Q5YIR8 Gm20760-201ENSMUST00000179197 648 ntBASIC18.57■□□□□ 0.56
Clec4a4Q5YIR8 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Clec4a4Q5YIR8 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Clec4a4Q5YIR8 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.57■□□□□ 0.56
Clec4a4Q5YIR8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Clec4a4Q5YIR8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Clec4a4Q5YIR8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Clec4a4Q5YIR8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clec4a4Q5YIR8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clec4a4Q5YIR8 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clec4a4Q5YIR8 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clec4a4Q5YIR8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clec4a4Q5YIR8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clec4a4Q5YIR8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Clec4a4Q5YIR8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
Clec4a4Q5YIR8 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clec4a4Q5YIR8 Gm13148-201ENSMUST00000118892 745 ntBASIC18.56■□□□□ 0.56
Clec4a4Q5YIR8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clec4a4Q5YIR8 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.56■□□□□ 0.56
Clec4a4Q5YIR8 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Clec4a4Q5YIR8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clec4a4Q5YIR8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Clec4a4Q5YIR8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Clec4a4Q5YIR8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Clec4a4Q5YIR8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clec4a4Q5YIR8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clec4a4Q5YIR8 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clec4a4Q5YIR8 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clec4a4Q5YIR8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clec4a4Q5YIR8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Clec4a4Q5YIR8 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Clec4a4Q5YIR8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Clec4a4Q5YIR8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Clec4a4Q5YIR8 Gm7290-201ENSMUST00000104990 617 ntBASIC18.55■□□□□ 0.56
Clec4a4Q5YIR8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Clec4a4Q5YIR8 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.55■□□□□ 0.56
Clec4a4Q5YIR8 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Clec4a4Q5YIR8 Gm12918-201ENSMUST00000120234 636 ntBASIC18.55■□□□□ 0.56
Clec4a4Q5YIR8 Gm15710-201ENSMUST00000121821 636 ntBASIC18.55■□□□□ 0.56
Clec4a4Q5YIR8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Clec4a4Q5YIR8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Clec4a4Q5YIR8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.55■□□□□ 0.56
Clec4a4Q5YIR8 Gm5075-201ENSMUST00000196916 622 ntBASIC18.55■□□□□ 0.56
Clec4a4Q5YIR8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.55■□□□□ 0.56
Clec4a4Q5YIR8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.55■□□□□ 0.56
Clec4a4Q5YIR8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clec4a4Q5YIR8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clec4a4Q5YIR8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clec4a4Q5YIR8 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.55■□□□□ 0.56
Clec4a4Q5YIR8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clec4a4Q5YIR8 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Clec4a4Q5YIR8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Clec4a4Q5YIR8 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Clec4a4Q5YIR8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clec4a4Q5YIR8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clec4a4Q5YIR8 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clec4a4Q5YIR8 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clec4a4Q5YIR8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.54■□□□□ 0.56
Clec4a4Q5YIR8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Clec4a4Q5YIR8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clec4a4Q5YIR8 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.54■□□□□ 0.56
Clec4a4Q5YIR8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms