Protein–RNA interactions for Protein: Q5RJH3

Cdh12, Cadherin-12, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh12Q5RJH3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Cdh12Q5RJH3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cdh12Q5RJH3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh12Q5RJH3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh12Q5RJH3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh12Q5RJH3 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh12Q5RJH3 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.78■□□□□ 0.44
Cdh12Q5RJH3 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh12Q5RJH3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Cdh12Q5RJH3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Cdh12Q5RJH3 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh12Q5RJH3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh12Q5RJH3 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh12Q5RJH3 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh12Q5RJH3 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Cdh12Q5RJH3 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.77■□□□□ 0.44
Cdh12Q5RJH3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh12Q5RJH3 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh12Q5RJH3 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh12Q5RJH3 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh12Q5RJH3 Gm12922-201ENSMUST00000120626 809 ntBASIC17.77■□□□□ 0.44
Cdh12Q5RJH3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.77■□□□□ 0.44
Cdh12Q5RJH3 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh12Q5RJH3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
Cdh12Q5RJH3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cdh12Q5RJH3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
Cdh12Q5RJH3 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh12Q5RJH3 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh12Q5RJH3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh12Q5RJH3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh12Q5RJH3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh12Q5RJH3 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh12Q5RJH3 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh12Q5RJH3 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh12Q5RJH3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh12Q5RJH3 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh12Q5RJH3 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh12Q5RJH3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh12Q5RJH3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cdh12Q5RJH3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Cdh12Q5RJH3 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh12Q5RJH3 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh12Q5RJH3 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh12Q5RJH3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Cdh12Q5RJH3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh12Q5RJH3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh12Q5RJH3 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh12Q5RJH3 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh12Q5RJH3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh12Q5RJH3 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh12Q5RJH3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh12Q5RJH3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh12Q5RJH3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh12Q5RJH3 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh12Q5RJH3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.74■□□□□ 0.43
Cdh12Q5RJH3 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Cdh12Q5RJH3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh12Q5RJH3 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh12Q5RJH3 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh12Q5RJH3 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh12Q5RJH3 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.74■□□□□ 0.43
Cdh12Q5RJH3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.74■□□□□ 0.43
Cdh12Q5RJH3 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.74■□□□□ 0.43
Cdh12Q5RJH3 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh12Q5RJH3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.74■□□□□ 0.43
Cdh12Q5RJH3 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh12Q5RJH3 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh12Q5RJH3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Cdh12Q5RJH3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Cdh12Q5RJH3 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Cdh12Q5RJH3 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh12Q5RJH3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Cdh12Q5RJH3 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh12Q5RJH3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Cdh12Q5RJH3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh12Q5RJH3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.73■□□□□ 0.43
Cdh12Q5RJH3 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh12Q5RJH3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh12Q5RJH3 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Cdh12Q5RJH3 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh12Q5RJH3 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh12Q5RJH3 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.73■□□□□ 0.43
Cdh12Q5RJH3 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh12Q5RJH3 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh12Q5RJH3 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh12Q5RJH3 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Cdh12Q5RJH3 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.73■□□□□ 0.43
Cdh12Q5RJH3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh12Q5RJH3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh12Q5RJH3 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh12Q5RJH3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh12Q5RJH3 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.72■□□□□ 0.43
Cdh12Q5RJH3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh12Q5RJH3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh12Q5RJH3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh12Q5RJH3 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh12Q5RJH3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.72■□□□□ 0.43
Cdh12Q5RJH3 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cdh12Q5RJH3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdh12Q5RJH3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms