Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Rnf43Q5NCP0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.35■□□□□ 0.69
Rnf43Q5NCP0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf43Q5NCP0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Rnf43Q5NCP0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf43Q5NCP0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf43Q5NCP0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf43Q5NCP0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf43Q5NCP0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf43Q5NCP0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.34■□□□□ 0.69
Rnf43Q5NCP0 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.34■□□□□ 0.69
Rnf43Q5NCP0 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.34■□□□□ 0.69
Rnf43Q5NCP0 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf43Q5NCP0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
Rnf43Q5NCP0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf43Q5NCP0 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf43Q5NCP0 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf43Q5NCP0 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Rnf43Q5NCP0 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Rnf43Q5NCP0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rnf43Q5NCP0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rnf43Q5NCP0 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rnf43Q5NCP0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rnf43Q5NCP0 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf43Q5NCP0 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf43Q5NCP0 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf43Q5NCP0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf43Q5NCP0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Rnf43Q5NCP0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf43Q5NCP0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf43Q5NCP0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Rnf43Q5NCP0 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.32■□□□□ 0.68
Rnf43Q5NCP0 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf43Q5NCP0 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf43Q5NCP0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.32■□□□□ 0.68
Rnf43Q5NCP0 Gm22325-201ENSMUST00000158904 308 ntBASIC19.32■□□□□ 0.68
Rnf43Q5NCP0 Gm27275-201ENSMUST00000184318 272 ntBASIC19.32■□□□□ 0.68
Rnf43Q5NCP0 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.32■□□□□ 0.68
Rnf43Q5NCP0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf43Q5NCP0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf43Q5NCP0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf43Q5NCP0 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Rnf43Q5NCP0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf43Q5NCP0 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Rnf43Q5NCP0 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Rnf43Q5NCP0 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.31■□□□□ 0.68
Rnf43Q5NCP0 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf43Q5NCP0 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf43Q5NCP0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf43Q5NCP0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf43Q5NCP0 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf43Q5NCP0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Rnf43Q5NCP0 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.31■□□□□ 0.68
Rnf43Q5NCP0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Rnf43Q5NCP0 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf43Q5NCP0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf43Q5NCP0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf43Q5NCP0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf43Q5NCP0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf43Q5NCP0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf43Q5NCP0 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.3■□□□□ 0.68
Rnf43Q5NCP0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf43Q5NCP0 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.3■□□□□ 0.68
Rnf43Q5NCP0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf43Q5NCP0 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf43Q5NCP0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf43Q5NCP0 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.3■□□□□ 0.68
Rnf43Q5NCP0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf43Q5NCP0 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf43Q5NCP0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf43Q5NCP0 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf43Q5NCP0 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Rnf43Q5NCP0 Mir6982-201ENSMUST00000184354 68 ntBASIC19.29■□□□□ 0.68
Rnf43Q5NCP0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.29■□□□□ 0.68
Rnf43Q5NCP0 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf43Q5NCP0 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.29■□□□□ 0.68
Rnf43Q5NCP0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf43Q5NCP0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf43Q5NCP0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf43Q5NCP0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf43Q5NCP0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf43Q5NCP0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf43Q5NCP0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf43Q5NCP0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Rnf43Q5NCP0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf43Q5NCP0 Gm5643-201ENSMUST00000117081 966 ntBASIC19.28■□□□□ 0.68
Rnf43Q5NCP0 Gm12896-201ENSMUST00000118430 226 ntBASIC19.28■□□□□ 0.68
Rnf43Q5NCP0 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Rnf43Q5NCP0 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Rnf43Q5NCP0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Rnf43Q5NCP0 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Rnf43Q5NCP0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf43Q5NCP0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf43Q5NCP0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf43Q5NCP0 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf43Q5NCP0 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf43Q5NCP0 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf43Q5NCP0 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf43Q5NCP0 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf43Q5NCP0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms