Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Vps13aQ5H8C4 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps13aQ5H8C4 Gm25925-201ENSMUST00000158314 306 ntBASIC19.07■□□□□ 0.64
Vps13aQ5H8C4 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Vps13aQ5H8C4 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Vps13aQ5H8C4 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps13aQ5H8C4 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Vps13aQ5H8C4 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps13aQ5H8C4 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Vps13aQ5H8C4 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Vps13aQ5H8C4 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps13aQ5H8C4 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Vps13aQ5H8C4 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps13aQ5H8C4 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps13aQ5H8C4 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps13aQ5H8C4 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps13aQ5H8C4 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Vps13aQ5H8C4 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vps13aQ5H8C4 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vps13aQ5H8C4 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vps13aQ5H8C4 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Vps13aQ5H8C4 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Vps13aQ5H8C4 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vps13aQ5H8C4 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Vps13aQ5H8C4 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vps13aQ5H8C4 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vps13aQ5H8C4 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Vps13aQ5H8C4 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.05■□□□□ 0.64
Vps13aQ5H8C4 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vps13aQ5H8C4 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Vps13aQ5H8C4 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vps13aQ5H8C4 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Vps13aQ5H8C4 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vps13aQ5H8C4 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
Vps13aQ5H8C4 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vps13aQ5H8C4 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vps13aQ5H8C4 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vps13aQ5H8C4 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Vps13aQ5H8C4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vps13aQ5H8C4 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vps13aQ5H8C4 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC19.05■□□□□ 0.64
Vps13aQ5H8C4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Vps13aQ5H8C4 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.05■□□□□ 0.64
Vps13aQ5H8C4 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vps13aQ5H8C4 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Vps13aQ5H8C4 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
Vps13aQ5H8C4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vps13aQ5H8C4 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vps13aQ5H8C4 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.04■□□□□ 0.64
Vps13aQ5H8C4 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.04■□□□□ 0.64
Vps13aQ5H8C4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Vps13aQ5H8C4 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Vps13aQ5H8C4 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Vps13aQ5H8C4 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.03■□□□□ 0.64
Vps13aQ5H8C4 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.03■□□□□ 0.64
Vps13aQ5H8C4 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Vps13aQ5H8C4 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps13aQ5H8C4 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Vps13aQ5H8C4 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps13aQ5H8C4 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Vps13aQ5H8C4 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps13aQ5H8C4 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Vps13aQ5H8C4 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.03■□□□□ 0.64
Vps13aQ5H8C4 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.03■□□□□ 0.64
Vps13aQ5H8C4 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.03■□□□□ 0.64
Vps13aQ5H8C4 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps13aQ5H8C4 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Vps13aQ5H8C4 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Vps13aQ5H8C4 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.02■□□□□ 0.64
Vps13aQ5H8C4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps13aQ5H8C4 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.02■□□□□ 0.64
Vps13aQ5H8C4 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Vps13aQ5H8C4 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Vps13aQ5H8C4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps13aQ5H8C4 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Vps13aQ5H8C4 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Vps13aQ5H8C4 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Vps13aQ5H8C4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps13aQ5H8C4 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps13aQ5H8C4 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps13aQ5H8C4 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.01■□□□□ 0.63
Vps13aQ5H8C4 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.01■□□□□ 0.63
Vps13aQ5H8C4 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Vps13aQ5H8C4 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps13aQ5H8C4 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps13aQ5H8C4 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.01■□□□□ 0.63
Vps13aQ5H8C4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
Vps13aQ5H8C4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps13aQ5H8C4 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19■□□□□ 0.63
Vps13aQ5H8C4 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps13aQ5H8C4 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps13aQ5H8C4 Dmtn-209ENSMUST00000228295 2572 ntBASIC19■□□□□ 0.63
Vps13aQ5H8C4 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps13aQ5H8C4 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps13aQ5H8C4 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps13aQ5H8C4 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Vps13aQ5H8C4 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps13aQ5H8C4 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19■□□□□ 0.63
Vps13aQ5H8C4 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps13aQ5H8C4 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms