Protein–RNA interactions for Protein: Q45KJ6

Lin28b, Protein lin-28 homolog B, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28bQ45KJ6 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lin28bQ45KJ6 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lin28bQ45KJ6 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.06■□□□□ 0.48
Lin28bQ45KJ6 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.06■□□□□ 0.48
Lin28bQ45KJ6 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lin28bQ45KJ6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lin28bQ45KJ6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Lin28bQ45KJ6 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lin28bQ45KJ6 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Lin28bQ45KJ6 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.05■□□□□ 0.48
Lin28bQ45KJ6 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lin28bQ45KJ6 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.05■□□□□ 0.48
Lin28bQ45KJ6 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.05■□□□□ 0.48
Lin28bQ45KJ6 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Lin28bQ45KJ6 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lin28bQ45KJ6 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lin28bQ45KJ6 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lin28bQ45KJ6 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lin28bQ45KJ6 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lin28bQ45KJ6 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lin28bQ45KJ6 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lin28bQ45KJ6 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lin28bQ45KJ6 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lin28bQ45KJ6 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Lin28bQ45KJ6 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Lin28bQ45KJ6 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.04■□□□□ 0.48
Lin28bQ45KJ6 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lin28bQ45KJ6 Gm6211-202ENSMUST00000167849 925 ntBASIC18.04■□□□□ 0.48
Lin28bQ45KJ6 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.04■□□□□ 0.48
Lin28bQ45KJ6 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lin28bQ45KJ6 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lin28bQ45KJ6 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Lin28bQ45KJ6 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lin28bQ45KJ6 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lin28bQ45KJ6 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lin28bQ45KJ6 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.03■□□□□ 0.48
Lin28bQ45KJ6 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lin28bQ45KJ6 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lin28bQ45KJ6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lin28bQ45KJ6 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Lin28bQ45KJ6 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Lin28bQ45KJ6 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Lin28bQ45KJ6 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lin28bQ45KJ6 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
Lin28bQ45KJ6 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lin28bQ45KJ6 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lin28bQ45KJ6 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lin28bQ45KJ6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lin28bQ45KJ6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lin28bQ45KJ6 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lin28bQ45KJ6 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lin28bQ45KJ6 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lin28bQ45KJ6 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lin28bQ45KJ6 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lin28bQ45KJ6 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Lin28bQ45KJ6 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lin28bQ45KJ6 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.01■□□□□ 0.47
Lin28bQ45KJ6 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Lin28bQ45KJ6 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Lin28bQ45KJ6 Gm32699-201ENSMUST00000221728 1988 ntBASIC18■□□□□ 0.47
Lin28bQ45KJ6 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Lin28bQ45KJ6 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Lin28bQ45KJ6 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Lin28bQ45KJ6 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18■□□□□ 0.47
Lin28bQ45KJ6 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18■□□□□ 0.47
Lin28bQ45KJ6 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Lin28bQ45KJ6 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18■□□□□ 0.47
Lin28bQ45KJ6 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18■□□□□ 0.47
Lin28bQ45KJ6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lin28bQ45KJ6 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lin28bQ45KJ6 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Lin28bQ45KJ6 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.99■□□□□ 0.47
Lin28bQ45KJ6 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lin28bQ45KJ6 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lin28bQ45KJ6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lin28bQ45KJ6 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lin28bQ45KJ6 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
Lin28bQ45KJ6 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Lin28bQ45KJ6 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lin28bQ45KJ6 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lin28bQ45KJ6 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Lin28bQ45KJ6 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lin28bQ45KJ6 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Lin28bQ45KJ6 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lin28bQ45KJ6 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lin28bQ45KJ6 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lin28bQ45KJ6 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Lin28bQ45KJ6 Golph3-202ENSMUST00000226517 2359 ntBASIC17.98■□□□□ 0.47
Lin28bQ45KJ6 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lin28bQ45KJ6 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lin28bQ45KJ6 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lin28bQ45KJ6 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lin28bQ45KJ6 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lin28bQ45KJ6 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Lin28bQ45KJ6 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Lin28bQ45KJ6 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.98■□□□□ 0.47
Lin28bQ45KJ6 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.98■□□□□ 0.47
Lin28bQ45KJ6 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lin28bQ45KJ6 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Lin28bQ45KJ6 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms