Protein–RNA interactions for Protein: Q3V079

Bbof1, Basal body-orientation factor 1, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bbof1Q3V079 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Bbof1Q3V079 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Bbof1Q3V079 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Bbof1Q3V079 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Bbof1Q3V079 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Bbof1Q3V079 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Bbof1Q3V079 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Bbof1Q3V079 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Bbof1Q3V079 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Bbof1Q3V079 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Bbof1Q3V079 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.7■□□□□ 0.9
Bbof1Q3V079 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Bbof1Q3V079 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Bbof1Q3V079 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Bbof1Q3V079 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Bbof1Q3V079 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Bbof1Q3V079 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Bbof1Q3V079 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Bbof1Q3V079 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Bbof1Q3V079 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Bbof1Q3V079 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.7■□□□□ 0.9
Bbof1Q3V079 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.7■□□□□ 0.9
Bbof1Q3V079 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Bbof1Q3V079 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Bbof1Q3V079 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.69■□□□□ 0.9
Bbof1Q3V079 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Bbof1Q3V079 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Bbof1Q3V079 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Bbof1Q3V079 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Bbof1Q3V079 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Bbof1Q3V079 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Bbof1Q3V079 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Bbof1Q3V079 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Bbof1Q3V079 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Bbof1Q3V079 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.68■□□□□ 0.9
Bbof1Q3V079 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.68■□□□□ 0.9
Bbof1Q3V079 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Bbof1Q3V079 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Bbof1Q3V079 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Bbof1Q3V079 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Bbof1Q3V079 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Bbof1Q3V079 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Bbof1Q3V079 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Bbof1Q3V079 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Bbof1Q3V079 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Bbof1Q3V079 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.67■□□□□ 0.9
Bbof1Q3V079 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.67■□□□□ 0.9
Bbof1Q3V079 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.67■□□□□ 0.9
Bbof1Q3V079 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Bbof1Q3V079 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Bbof1Q3V079 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Bbof1Q3V079 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.67■□□□□ 0.9
Bbof1Q3V079 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Bbof1Q3V079 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Bbof1Q3V079 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Bbof1Q3V079 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Bbof1Q3V079 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.66■□□□□ 0.9
Bbof1Q3V079 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Bbof1Q3V079 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.66■□□□□ 0.9
Bbof1Q3V079 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Bbof1Q3V079 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Bbof1Q3V079 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Bbof1Q3V079 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Bbof1Q3V079 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Bbof1Q3V079 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Bbof1Q3V079 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Bbof1Q3V079 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.66■□□□□ 0.9
Bbof1Q3V079 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Bbof1Q3V079 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Bbof1Q3V079 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Bbof1Q3V079 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Bbof1Q3V079 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Bbof1Q3V079 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Bbof1Q3V079 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Bbof1Q3V079 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Bbof1Q3V079 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Bbof1Q3V079 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.65■□□□□ 0.9
Bbof1Q3V079 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Bbof1Q3V079 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Bbof1Q3V079 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Bbof1Q3V079 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Bbof1Q3V079 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Bbof1Q3V079 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Bbof1Q3V079 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Bbof1Q3V079 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Bbof1Q3V079 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Bbof1Q3V079 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Bbof1Q3V079 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.64■□□□□ 0.89
Bbof1Q3V079 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Bbof1Q3V079 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.64■□□□□ 0.89
Bbof1Q3V079 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Bbof1Q3V079 Gm27801-201ENSMUST00000184174 223 ntBASIC20.64■□□□□ 0.89
Bbof1Q3V079 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.64■□□□□ 0.89
Bbof1Q3V079 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.64■□□□□ 0.89
Bbof1Q3V079 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.64■□□□□ 0.89
Bbof1Q3V079 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Bbof1Q3V079 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Bbof1Q3V079 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Bbof1Q3V079 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Bbof1Q3V079 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms