Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC22.8■■□□□ 1.24
Col5a2Q3U962 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC22.8■■□□□ 1.24
Col5a2Q3U962 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Col5a2Q3U962 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Col5a2Q3U962 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
Col5a2Q3U962 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Col5a2Q3U962 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC22.8■■□□□ 1.24
Col5a2Q3U962 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Col5a2Q3U962 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
Col5a2Q3U962 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Col5a2Q3U962 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Col5a2Q3U962 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Col5a2Q3U962 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Col5a2Q3U962 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Col5a2Q3U962 AC152827.1-201ENSMUST00000221143 2189 ntBASIC22.79■■□□□ 1.24
Col5a2Q3U962 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC22.79■■□□□ 1.24
Col5a2Q3U962 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Col5a2Q3U962 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Col5a2Q3U962 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Col5a2Q3U962 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Col5a2Q3U962 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
Col5a2Q3U962 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Col5a2Q3U962 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Col5a2Q3U962 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
Col5a2Q3U962 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Col5a2Q3U962 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Col5a2Q3U962 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Col5a2Q3U962 Gm8668-201ENSMUST00000120559 1447 ntBASIC22.77■■□□□ 1.24
Col5a2Q3U962 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
Col5a2Q3U962 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Col5a2Q3U962 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Col5a2Q3U962 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Col5a2Q3U962 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC22.77■■□□□ 1.23
Col5a2Q3U962 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Col5a2Q3U962 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Col5a2Q3U962 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Col5a2Q3U962 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Col5a2Q3U962 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Col5a2Q3U962 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Col5a2Q3U962 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Col5a2Q3U962 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Col5a2Q3U962 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Col5a2Q3U962 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Col5a2Q3U962 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Col5a2Q3U962 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Col5a2Q3U962 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Col5a2Q3U962 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Col5a2Q3U962 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Col5a2Q3U962 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Col5a2Q3U962 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
Col5a2Q3U962 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC22.75■■□□□ 1.23
Col5a2Q3U962 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Col5a2Q3U962 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Col5a2Q3U962 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Col5a2Q3U962 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Col5a2Q3U962 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC22.74■■□□□ 1.23
Col5a2Q3U962 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Col5a2Q3U962 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Col5a2Q3U962 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
Col5a2Q3U962 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Col5a2Q3U962 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.74■■□□□ 1.23
Col5a2Q3U962 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Col5a2Q3U962 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
Col5a2Q3U962 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Col5a2Q3U962 Gm15847-201ENSMUST00000121417 1065 ntBASIC22.73■■□□□ 1.23
Col5a2Q3U962 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC22.73■■□□□ 1.23
Col5a2Q3U962 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC22.73■■□□□ 1.23
Col5a2Q3U962 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Col5a2Q3U962 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Col5a2Q3U962 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Col5a2Q3U962 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Col5a2Q3U962 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC22.73■■□□□ 1.23
Col5a2Q3U962 Gm21814-202ENSMUST00000203277 873 ntBASIC22.73■■□□□ 1.23
Col5a2Q3U962 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Col5a2Q3U962 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Col5a2Q3U962 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Col5a2Q3U962 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Col5a2Q3U962 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC22.72■■□□□ 1.23
Col5a2Q3U962 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Col5a2Q3U962 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
Col5a2Q3U962 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Col5a2Q3U962 AC140264.2-202ENSMUST00000218746 817 ntBASIC22.72■■□□□ 1.23
Col5a2Q3U962 Gm10819-201ENSMUST00000099988 561 ntBASIC22.72■■□□□ 1.23
Col5a2Q3U962 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC22.72■■□□□ 1.23
Col5a2Q3U962 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Col5a2Q3U962 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Col5a2Q3U962 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
Col5a2Q3U962 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC22.71■■□□□ 1.23
Col5a2Q3U962 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC22.71■■□□□ 1.23
Col5a2Q3U962 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC22.71■■□□□ 1.23
Col5a2Q3U962 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Col5a2Q3U962 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
Col5a2Q3U962 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Col5a2Q3U962 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
Col5a2Q3U962 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Col5a2Q3U962 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Col5a2Q3U962 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC22.7■■□□□ 1.22
Col5a2Q3U962 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC22.7■■□□□ 1.22
Col5a2Q3U962 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Col5a2Q3U962 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC22.7■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms