Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q3KNL4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.62■□□□□ 0.57
Q3KNL4 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.62■□□□□ 0.57
Q3KNL4 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q3KNL4 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q3KNL4 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Q3KNL4 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.61■□□□□ 0.57
Q3KNL4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Q3KNL4 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Q3KNL4 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.61■□□□□ 0.57
Q3KNL4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Q3KNL4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Q3KNL4 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Q3KNL4 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Q3KNL4 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Q3KNL4 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Q3KNL4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.61■□□□□ 0.57
Q3KNL4 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Q3KNL4 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Q3KNL4 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Q3KNL4 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Q3KNL4 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Q3KNL4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Q3KNL4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Q3KNL4 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Q3KNL4 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Q3KNL4 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Q3KNL4 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Q3KNL4 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Q3KNL4 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Q3KNL4 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.59■□□□□ 0.57
Q3KNL4 Gm43137-201ENSMUST00000198052 594 ntBASIC18.59■□□□□ 0.57
Q3KNL4 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Q3KNL4 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Q3KNL4 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Q3KNL4 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Q3KNL4 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Q3KNL4 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Q3KNL4 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Q3KNL4 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Q3KNL4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Q3KNL4 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Q3KNL4 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Q3KNL4 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Q3KNL4 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Q3KNL4 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Q3KNL4 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Q3KNL4 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Q3KNL4 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Q3KNL4 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.58■□□□□ 0.56
Q3KNL4 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Q3KNL4 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Q3KNL4 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Q3KNL4 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Q3KNL4 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Q3KNL4 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Q3KNL4 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q3KNL4 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q3KNL4 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q3KNL4 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Q3KNL4 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q3KNL4 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.57■□□□□ 0.56
Q3KNL4 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Q3KNL4 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.57■□□□□ 0.56
Q3KNL4 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q3KNL4 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q3KNL4 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Q3KNL4 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q3KNL4 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q3KNL4 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.57■□□□□ 0.56
Q3KNL4 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.57■□□□□ 0.56
Q3KNL4 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Q3KNL4 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q3KNL4 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Q3KNL4 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q3KNL4 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q3KNL4 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Q3KNL4 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Q3KNL4 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q3KNL4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q3KNL4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Q3KNL4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.56■□□□□ 0.56
Q3KNL4 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.56■□□□□ 0.56
Q3KNL4 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.56■□□□□ 0.56
Q3KNL4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Q3KNL4 Spcs1-204ENSMUST00000226782 949 ntBASIC18.56■□□□□ 0.56
Q3KNL4 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Q3KNL4 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.56■□□□□ 0.56
Q3KNL4 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q3KNL4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q3KNL4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q3KNL4 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q3KNL4 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Q3KNL4 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q3KNL4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q3KNL4 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q3KNL4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Q3KNL4 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.55■□□□□ 0.56
Q3KNL4 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.55■□□□□ 0.56
Q3KNL4 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms