Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ebf1Q07802 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ebf1Q07802 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ebf1Q07802 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.18■□□□□ 0.66
Ebf1Q07802 Gm6211-202ENSMUST00000167849 925 ntBASIC19.18■□□□□ 0.66
Ebf1Q07802 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ebf1Q07802 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ebf1Q07802 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.18■□□□□ 0.66
Ebf1Q07802 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ebf1Q07802 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Ebf1Q07802 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ebf1Q07802 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ebf1Q07802 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
Ebf1Q07802 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ebf1Q07802 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ebf1Q07802 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ebf1Q07802 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ebf1Q07802 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.17■□□□□ 0.66
Ebf1Q07802 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.17■□□□□ 0.66
Ebf1Q07802 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ebf1Q07802 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ebf1Q07802 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.17■□□□□ 0.66
Ebf1Q07802 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ebf1Q07802 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.17■□□□□ 0.66
Ebf1Q07802 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.17■□□□□ 0.66
Ebf1Q07802 Gm13168-201ENSMUST00000121771 632 ntBASIC19.17■□□□□ 0.66
Ebf1Q07802 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.17■□□□□ 0.66
Ebf1Q07802 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ebf1Q07802 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.17■□□□□ 0.66
Ebf1Q07802 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.17■□□□□ 0.66
Ebf1Q07802 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ebf1Q07802 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.17■□□□□ 0.66
Ebf1Q07802 AA386476-201ENSMUST00000098781 1665 ntBASIC19.17■□□□□ 0.66
Ebf1Q07802 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ebf1Q07802 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ebf1Q07802 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ebf1Q07802 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ebf1Q07802 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ebf1Q07802 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ebf1Q07802 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ebf1Q07802 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ebf1Q07802 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ebf1Q07802 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.16■□□□□ 0.66
Ebf1Q07802 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ebf1Q07802 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ebf1Q07802 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ebf1Q07802 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ebf1Q07802 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ebf1Q07802 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ebf1Q07802 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ebf1Q07802 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ebf1Q07802 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.15■□□□□ 0.66
Ebf1Q07802 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ebf1Q07802 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ebf1Q07802 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ebf1Q07802 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ebf1Q07802 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.66
Ebf1Q07802 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ebf1Q07802 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.14■□□□□ 0.65
Ebf1Q07802 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ebf1Q07802 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.14■□□□□ 0.65
Ebf1Q07802 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.14■□□□□ 0.65
Ebf1Q07802 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ebf1Q07802 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ebf1Q07802 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.14■□□□□ 0.65
Ebf1Q07802 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ebf1Q07802 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ebf1Q07802 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Ebf1Q07802 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.13■□□□□ 0.65
Ebf1Q07802 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ebf1Q07802 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ebf1Q07802 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ebf1Q07802 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ebf1Q07802 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Ebf1Q07802 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ebf1Q07802 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Ebf1Q07802 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ebf1Q07802 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.12■□□□□ 0.65
Ebf1Q07802 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.12■□□□□ 0.65
Ebf1Q07802 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ebf1Q07802 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ebf1Q07802 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ebf1Q07802 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.12■□□□□ 0.65
Ebf1Q07802 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ebf1Q07802 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ebf1Q07802 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ebf1Q07802 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Ebf1Q07802 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ebf1Q07802 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ebf1Q07802 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.12■□□□□ 0.65
Ebf1Q07802 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.12■□□□□ 0.65
Ebf1Q07802 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ebf1Q07802 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Ebf1Q07802 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ebf1Q07802 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ebf1Q07802 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ebf1Q07802 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Ebf1Q07802 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Ebf1Q07802 Gm37856-201ENSMUST00000191634 999 ntBASIC19.11■□□□□ 0.65
Ebf1Q07802 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms