Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hspg2Q05793 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hspg2Q05793 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.19□□□□□ -0.14
Hspg2Q05793 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hspg2Q05793 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Hspg2Q05793 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Hspg2Q05793 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hspg2Q05793 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Hspg2Q05793 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hspg2Q05793 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.19□□□□□ -0.14
Hspg2Q05793 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hspg2Q05793 Gm6277-202ENSMUST00000224036 2779 ntBASIC14.19□□□□□ -0.14
Hspg2Q05793 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Hspg2Q05793 Gm10231-201ENSMUST00000181584 441 ntBASIC14.18□□□□□ -0.14
Hspg2Q05793 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hspg2Q05793 Gm10175-202ENSMUST00000208752 441 ntBASIC14.18□□□□□ -0.14
Hspg2Q05793 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hspg2Q05793 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hspg2Q05793 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hspg2Q05793 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hspg2Q05793 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hspg2Q05793 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hspg2Q05793 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hspg2Q05793 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hspg2Q05793 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hspg2Q05793 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Hspg2Q05793 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hspg2Q05793 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.18□□□□□ -0.14
Hspg2Q05793 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Hspg2Q05793 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hspg2Q05793 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hspg2Q05793 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hspg2Q05793 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hspg2Q05793 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.17□□□□□ -0.14
Hspg2Q05793 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hspg2Q05793 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC14.17□□□□□ -0.14
Hspg2Q05793 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hspg2Q05793 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hspg2Q05793 Gm2559-201ENSMUST00000201323 363 ntBASIC14.17□□□□□ -0.14
Hspg2Q05793 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hspg2Q05793 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hspg2Q05793 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hspg2Q05793 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hspg2Q05793 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hspg2Q05793 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hspg2Q05793 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Hspg2Q05793 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hspg2Q05793 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hspg2Q05793 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hspg2Q05793 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Hspg2Q05793 Gm37055-201ENSMUST00000191866 133 ntBASIC14.16□□□□□ -0.14
Hspg2Q05793 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.16□□□□□ -0.14
Hspg2Q05793 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hspg2Q05793 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Hspg2Q05793 AA386476-201ENSMUST00000098781 1665 ntBASIC14.16□□□□□ -0.14
Hspg2Q05793 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hspg2Q05793 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hspg2Q05793 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.15□□□□□ -0.14
Hspg2Q05793 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hspg2Q05793 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Hspg2Q05793 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hspg2Q05793 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hspg2Q05793 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hspg2Q05793 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hspg2Q05793 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hspg2Q05793 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hspg2Q05793 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Hspg2Q05793 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.15□□□□□ -0.14
Hspg2Q05793 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Hspg2Q05793 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hspg2Q05793 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hspg2Q05793 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Hspg2Q05793 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hspg2Q05793 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.14□□□□□ -0.15
Hspg2Q05793 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hspg2Q05793 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hspg2Q05793 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Hspg2Q05793 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Hspg2Q05793 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hspg2Q05793 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hspg2Q05793 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hspg2Q05793 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hspg2Q05793 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC14.14□□□□□ -0.15
Hspg2Q05793 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hspg2Q05793 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Hspg2Q05793 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hspg2Q05793 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hspg2Q05793 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hspg2Q05793 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hspg2Q05793 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hspg2Q05793 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hspg2Q05793 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.13□□□□□ -0.15
Hspg2Q05793 Gm5913-201ENSMUST00000119397 1399 ntBASIC14.13□□□□□ -0.15
Hspg2Q05793 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hspg2Q05793 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hspg2Q05793 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hspg2Q05793 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.13□□□□□ -0.15
Hspg2Q05793 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.13□□□□□ -0.15
Hspg2Q05793 Gm43799-201ENSMUST00000201845 579 ntBASIC14.13□□□□□ -0.15
Hspg2Q05793 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms