Protein–RNA interactions for Protein: P97812

Ihh, Indian hedgehog protein, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IhhP97812 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
IhhP97812 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
IhhP97812 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IhhP97812 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IhhP97812 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IhhP97812 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
IhhP97812 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
IhhP97812 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IhhP97812 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IhhP97812 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.79■□□□□ 0.76
IhhP97812 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IhhP97812 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
IhhP97812 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
IhhP97812 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
IhhP97812 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IhhP97812 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IhhP97812 Gm13148-201ENSMUST00000118892 745 ntBASIC19.78■□□□□ 0.76
IhhP97812 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.78■□□□□ 0.76
IhhP97812 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IhhP97812 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IhhP97812 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IhhP97812 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IhhP97812 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
IhhP97812 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
IhhP97812 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
IhhP97812 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
IhhP97812 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
IhhP97812 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
IhhP97812 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
IhhP97812 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
IhhP97812 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
IhhP97812 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
IhhP97812 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IhhP97812 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
IhhP97812 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.76■□□□□ 0.75
IhhP97812 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
IhhP97812 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.76■□□□□ 0.75
IhhP97812 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
IhhP97812 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
IhhP97812 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IhhP97812 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IhhP97812 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
IhhP97812 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
IhhP97812 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
IhhP97812 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
IhhP97812 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IhhP97812 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IhhP97812 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IhhP97812 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
IhhP97812 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IhhP97812 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IhhP97812 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IhhP97812 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IhhP97812 Gm6365-201ENSMUST00000054711 744 ntBASIC19.75■□□□□ 0.75
IhhP97812 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
IhhP97812 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IhhP97812 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IhhP97812 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IhhP97812 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
IhhP97812 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
IhhP97812 Gm12933-201ENSMUST00000120203 872 ntBASIC19.74■□□□□ 0.75
IhhP97812 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
IhhP97812 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IhhP97812 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IhhP97812 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
IhhP97812 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
IhhP97812 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
IhhP97812 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
IhhP97812 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
IhhP97812 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
IhhP97812 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.73■□□□□ 0.75
IhhP97812 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
IhhP97812 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
IhhP97812 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IhhP97812 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
IhhP97812 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IhhP97812 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.73■□□□□ 0.75
IhhP97812 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
IhhP97812 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
IhhP97812 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IhhP97812 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
IhhP97812 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IhhP97812 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
IhhP97812 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.73■□□□□ 0.75
IhhP97812 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
IhhP97812 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
IhhP97812 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IhhP97812 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
IhhP97812 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IhhP97812 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
IhhP97812 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
IhhP97812 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
IhhP97812 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IhhP97812 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
IhhP97812 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
IhhP97812 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IhhP97812 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IhhP97812 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.71■□□□□ 0.75
IhhP97812 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
IhhP97812 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms