Protein–RNA interactions for Protein: P97742

Cpt1a, Carnitine O-palmitoyltransferase 1, liver isoform, mousemouse

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpt1aP97742 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpt1aP97742 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cpt1aP97742 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.48■□□□□ 0.55
Cpt1aP97742 Gm38205-201ENSMUST00000192243 258 ntBASIC18.48■□□□□ 0.55
Cpt1aP97742 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cpt1aP97742 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.48■□□□□ 0.55
Cpt1aP97742 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpt1aP97742 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpt1aP97742 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Cpt1aP97742 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cpt1aP97742 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpt1aP97742 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.48■□□□□ 0.55
Cpt1aP97742 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpt1aP97742 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Cpt1aP97742 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpt1aP97742 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.47■□□□□ 0.55
Cpt1aP97742 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Cpt1aP97742 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpt1aP97742 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cpt1aP97742 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpt1aP97742 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpt1aP97742 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.47■□□□□ 0.55
Cpt1aP97742 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cpt1aP97742 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Cpt1aP97742 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.47■□□□□ 0.55
Cpt1aP97742 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpt1aP97742 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Cpt1aP97742 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpt1aP97742 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpt1aP97742 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpt1aP97742 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpt1aP97742 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpt1aP97742 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpt1aP97742 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Cpt1aP97742 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpt1aP97742 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cpt1aP97742 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.46■□□□□ 0.55
Cpt1aP97742 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.46■□□□□ 0.55
Cpt1aP97742 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpt1aP97742 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Cpt1aP97742 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Cpt1aP97742 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Cpt1aP97742 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Cpt1aP97742 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Cpt1aP97742 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Cpt1aP97742 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpt1aP97742 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cpt1aP97742 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cpt1aP97742 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cpt1aP97742 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.45■□□□□ 0.54
Cpt1aP97742 Gm37179-201ENSMUST00000194862 823 ntBASIC18.45■□□□□ 0.54
Cpt1aP97742 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.45■□□□□ 0.54
Cpt1aP97742 Gm7514-201ENSMUST00000209475 934 ntBASIC18.45■□□□□ 0.54
Cpt1aP97742 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Cpt1aP97742 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpt1aP97742 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cpt1aP97742 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpt1aP97742 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
Cpt1aP97742 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cpt1aP97742 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Cpt1aP97742 Gm7860-201ENSMUST00000121190 879 ntBASIC18.44■□□□□ 0.54
Cpt1aP97742 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.44■□□□□ 0.54
Cpt1aP97742 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.44■□□□□ 0.54
Cpt1aP97742 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpt1aP97742 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpt1aP97742 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.44■□□□□ 0.54
Cpt1aP97742 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Cpt1aP97742 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpt1aP97742 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Cpt1aP97742 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.44■□□□□ 0.54
Cpt1aP97742 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpt1aP97742 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpt1aP97742 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpt1aP97742 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Cpt1aP97742 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpt1aP97742 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cpt1aP97742 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Cpt1aP97742 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Cpt1aP97742 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpt1aP97742 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpt1aP97742 Gm13146-201ENSMUST00000118508 780 ntBASIC18.43■□□□□ 0.54
Cpt1aP97742 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cpt1aP97742 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cpt1aP97742 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.43■□□□□ 0.54
Cpt1aP97742 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.43■□□□□ 0.54
Cpt1aP97742 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpt1aP97742 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpt1aP97742 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpt1aP97742 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpt1aP97742 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpt1aP97742 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Cpt1aP97742 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpt1aP97742 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpt1aP97742 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpt1aP97742 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Cpt1aP97742 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.42■□□□□ 0.54
Cpt1aP97742 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpt1aP97742 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Cpt1aP97742 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Cpt1aP97742 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms