Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx3-2P97503 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx3-2P97503 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx3-2P97503 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.85■□□□□ 0.45
Nkx3-2P97503 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Nkx3-2P97503 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.85■□□□□ 0.45
Nkx3-2P97503 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx3-2P97503 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx3-2P97503 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx3-2P97503 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx3-2P97503 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Nkx3-2P97503 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx3-2P97503 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.84■□□□□ 0.45
Nkx3-2P97503 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx3-2P97503 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Nkx3-2P97503 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx3-2P97503 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx3-2P97503 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx3-2P97503 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx3-2P97503 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Nkx3-2P97503 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.84■□□□□ 0.45
Nkx3-2P97503 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx3-2P97503 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx3-2P97503 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx3-2P97503 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Nkx3-2P97503 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nkx3-2P97503 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.83■□□□□ 0.45
Nkx3-2P97503 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nkx3-2P97503 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nkx3-2P97503 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nkx3-2P97503 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Nkx3-2P97503 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Nkx3-2P97503 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx3-2P97503 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Nkx3-2P97503 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.83■□□□□ 0.44
Nkx3-2P97503 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Nkx3-2P97503 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Nkx3-2P97503 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Nkx3-2P97503 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx3-2P97503 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx3-2P97503 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Nkx3-2P97503 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx3-2P97503 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx3-2P97503 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx3-2P97503 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Nkx3-2P97503 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Nkx3-2P97503 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx3-2P97503 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx3-2P97503 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx3-2P97503 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx3-2P97503 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx3-2P97503 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.82■□□□□ 0.44
Nkx3-2P97503 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Nkx3-2P97503 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx3-2P97503 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx3-2P97503 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx3-2P97503 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx3-2P97503 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx3-2P97503 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx3-2P97503 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx3-2P97503 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx3-2P97503 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx3-2P97503 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Nkx3-2P97503 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Nkx3-2P97503 Gm13534-201ENSMUST00000121169 513 ntBASIC17.81■□□□□ 0.44
Nkx3-2P97503 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.81■□□□□ 0.44
Nkx3-2P97503 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx3-2P97503 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.81■□□□□ 0.44
Nkx3-2P97503 Gm10602-201ENSMUST00000098239 609 ntBASIC17.81■□□□□ 0.44
Nkx3-2P97503 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx3-2P97503 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx3-2P97503 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx3-2P97503 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.81■□□□□ 0.44
Nkx3-2P97503 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx3-2P97503 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx3-2P97503 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx3-2P97503 Gm38205-201ENSMUST00000192243 258 ntBASIC17.8■□□□□ 0.44
Nkx3-2P97503 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx3-2P97503 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx3-2P97503 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx3-2P97503 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx3-2P97503 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.8■□□□□ 0.44
Nkx3-2P97503 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx3-2P97503 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx3-2P97503 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx3-2P97503 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx3-2P97503 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx3-2P97503 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Nkx3-2P97503 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Nkx3-2P97503 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx3-2P97503 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx3-2P97503 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx3-2P97503 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Nkx3-2P97503 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.79■□□□□ 0.44
Nkx3-2P97503 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Nkx3-2P97503 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Nkx3-2P97503 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx3-2P97503 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.79■□□□□ 0.44
Nkx3-2P97503 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nkx3-2P97503 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms