Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim43bP86448 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Trim43bP86448 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim43bP86448 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim43bP86448 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim43bP86448 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim43bP86448 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim43bP86448 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.43■□□□□ 0.7
Trim43bP86448 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim43bP86448 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.43■□□□□ 0.7
Trim43bP86448 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim43bP86448 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.43■□□□□ 0.7
Trim43bP86448 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim43bP86448 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Trim43bP86448 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim43bP86448 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Trim43bP86448 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim43bP86448 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim43bP86448 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim43bP86448 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim43bP86448 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim43bP86448 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim43bP86448 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim43bP86448 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim43bP86448 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.42■□□□□ 0.7
Trim43bP86448 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim43bP86448 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim43bP86448 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
Trim43bP86448 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim43bP86448 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim43bP86448 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Trim43bP86448 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim43bP86448 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim43bP86448 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim43bP86448 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Trim43bP86448 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Trim43bP86448 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim43bP86448 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Trim43bP86448 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim43bP86448 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim43bP86448 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim43bP86448 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim43bP86448 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim43bP86448 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.4■□□□□ 0.7
Trim43bP86448 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.4■□□□□ 0.7
Trim43bP86448 Gm43173-201ENSMUST00000202246 593 ntBASIC19.4■□□□□ 0.7
Trim43bP86448 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.4■□□□□ 0.7
Trim43bP86448 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.4■□□□□ 0.7
Trim43bP86448 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim43bP86448 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim43bP86448 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim43bP86448 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim43bP86448 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim43bP86448 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim43bP86448 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim43bP86448 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim43bP86448 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim43bP86448 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim43bP86448 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim43bP86448 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim43bP86448 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Trim43bP86448 Gm43017-201ENSMUST00000198296 752 ntBASIC19.39■□□□□ 0.69
Trim43bP86448 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Trim43bP86448 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.39■□□□□ 0.69
Trim43bP86448 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Trim43bP86448 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.39■□□□□ 0.69
Trim43bP86448 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim43bP86448 Grk6-206ENSMUST00000224995 2971 ntBASIC19.38■□□□□ 0.69
Trim43bP86448 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim43bP86448 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim43bP86448 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim43bP86448 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim43bP86448 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim43bP86448 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim43bP86448 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim43bP86448 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.38■□□□□ 0.69
Trim43bP86448 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim43bP86448 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim43bP86448 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim43bP86448 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim43bP86448 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim43bP86448 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.38■□□□□ 0.69
Trim43bP86448 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim43bP86448 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim43bP86448 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim43bP86448 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim43bP86448 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.37■□□□□ 0.69
Trim43bP86448 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.37■□□□□ 0.69
Trim43bP86448 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim43bP86448 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.37■□□□□ 0.69
Trim43bP86448 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim43bP86448 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim43bP86448 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim43bP86448 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim43bP86448 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim43bP86448 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Trim43bP86448 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Trim43bP86448 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim43bP86448 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim43bP86448 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms