Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Cux2P70298 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
Cux2P70298 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC31.6■■■□□ 2.65
Cux2P70298 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Cux2P70298 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Cux2P70298 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC31.59■■■□□ 2.65
Cux2P70298 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Cux2P70298 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Cux2P70298 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Cux2P70298 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Cux2P70298 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC31.59■■■□□ 2.65
Cux2P70298 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC31.59■■■□□ 2.65
Cux2P70298 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC31.59■■■□□ 2.65
Cux2P70298 Gm11927-201ENSMUST00000118472 759 ntBASIC31.58■■■□□ 2.65
Cux2P70298 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Cux2P70298 Arhgef4-208ENSMUST00000211073 171 ntBASIC31.58■■■□□ 2.65
Cux2P70298 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC31.58■■■□□ 2.65
Cux2P70298 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
Cux2P70298 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Cux2P70298 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Cux2P70298 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC31.58■■■□□ 2.65
Cux2P70298 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Cux2P70298 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Cux2P70298 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Cux2P70298 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Cux2P70298 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
Cux2P70298 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Cux2P70298 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.65
Cux2P70298 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC31.57■■■□□ 2.64
Cux2P70298 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
Cux2P70298 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.64
Cux2P70298 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Cux2P70298 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC31.57■■■□□ 2.64
Cux2P70298 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Cux2P70298 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Cux2P70298 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Cux2P70298 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC31.56■■■□□ 2.64
Cux2P70298 Gm11539-201ENSMUST00000119837 557 ntBASIC31.56■■■□□ 2.64
Cux2P70298 Gm13436-201ENSMUST00000120418 567 ntBASIC31.56■■■□□ 2.64
Cux2P70298 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
Cux2P70298 Gm7889-201ENSMUST00000185591 958 ntBASIC31.56■■■□□ 2.64
Cux2P70298 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
Cux2P70298 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Cux2P70298 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC31.55■■■□□ 2.64
Cux2P70298 Gm10517-202ENSMUST00000192970 758 ntBASIC31.55■■■□□ 2.64
Cux2P70298 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC31.55■■■□□ 2.64
Cux2P70298 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Cux2P70298 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Cux2P70298 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC31.55■■■□□ 2.64
Cux2P70298 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC31.54■■■□□ 2.64
Cux2P70298 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Cux2P70298 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC31.54■■■□□ 2.64
Cux2P70298 Gm6728-201ENSMUST00000178117 1065 ntBASIC31.54■■■□□ 2.64
Cux2P70298 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC31.54■■■□□ 2.64
Cux2P70298 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Cux2P70298 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
Cux2P70298 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Cux2P70298 Gm16042-201ENSMUST00000204813 1247 ntBASIC31.53■■■□□ 2.64
Cux2P70298 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC31.53■■■□□ 2.64
Cux2P70298 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Cux2P70298 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Cux2P70298 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Cux2P70298 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Cux2P70298 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC31.52■■■□□ 2.64
Cux2P70298 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Cux2P70298 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
Cux2P70298 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
Cux2P70298 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Cux2P70298 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Cux2P70298 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
Cux2P70298 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Cux2P70298 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC31.49■■■□□ 2.63
Cux2P70298 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Cux2P70298 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Cux2P70298 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
Cux2P70298 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
Cux2P70298 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC31.49■■■□□ 2.63
Cux2P70298 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC31.49■■■□□ 2.63
Cux2P70298 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Cux2P70298 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
Cux2P70298 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
Cux2P70298 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Cux2P70298 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Cux2P70298 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Cux2P70298 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
Cux2P70298 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC31.48■■■□□ 2.63
Cux2P70298 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
Cux2P70298 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
Cux2P70298 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Cux2P70298 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC31.48■■■□□ 2.63
Cux2P70298 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
Cux2P70298 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC31.48■■■□□ 2.63
Cux2P70298 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Cux2P70298 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Cux2P70298 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC31.47■■■□□ 2.63
Cux2P70298 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC31.47■■■□□ 2.63
Cux2P70298 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Cux2P70298 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC31.47■■■□□ 2.63
Cux2P70298 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Cux2P70298 Gm26766-202ENSMUST00000227544 2347 ntBASIC31.47■■■□□ 2.63
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms