Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC13.54□□□□□ -0.24
Rpl39P62892 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rpl39P62892 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rpl39P62892 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rpl39P62892 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rpl39P62892 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Rpl39P62892 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rpl39P62892 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpl39P62892 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpl39P62892 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpl39P62892 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpl39P62892 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpl39P62892 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC13.53□□□□□ -0.24
Rpl39P62892 Etf1-202ENSMUST00000180351 108 ntBASIC13.53□□□□□ -0.24
Rpl39P62892 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC13.53□□□□□ -0.24
Rpl39P62892 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC13.53□□□□□ -0.24
Rpl39P62892 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpl39P62892 Gm42939-201ENSMUST00000197514 2205 ntBASIC13.53□□□□□ -0.24
Rpl39P62892 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Rpl39P62892 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpl39P62892 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpl39P62892 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Rpl39P62892 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpl39P62892 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC13.53□□□□□ -0.24
Rpl39P62892 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpl39P62892 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rpl39P62892 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpl39P62892 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Rpl39P62892 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rpl39P62892 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC13.52□□□□□ -0.24
Rpl39P62892 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Rpl39P62892 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rpl39P62892 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rpl39P62892 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rpl39P62892 Gm45606-201ENSMUST00000209836 2795 ntBASIC13.52□□□□□ -0.24
Rpl39P62892 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpl39P62892 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC13.52□□□□□ -0.25
Rpl39P62892 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rpl39P62892 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpl39P62892 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpl39P62892 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpl39P62892 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpl39P62892 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC13.52□□□□□ -0.25
Rpl39P62892 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Rpl39P62892 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpl39P62892 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpl39P62892 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpl39P62892 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpl39P62892 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpl39P62892 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpl39P62892 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpl39P62892 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpl39P62892 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Rpl39P62892 Gm43182-201ENSMUST00000199476 2528 ntBASIC13.51□□□□□ -0.25
Rpl39P62892 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpl39P62892 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpl39P62892 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpl39P62892 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpl39P62892 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpl39P62892 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpl39P62892 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
Rpl39P62892 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpl39P62892 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Rpl39P62892 Gm10657-201ENSMUST00000193528 1031 ntBASIC13.51□□□□□ -0.25
Rpl39P62892 Gm9870-201ENSMUST00000063874 645 ntBASIC13.51□□□□□ -0.25
Rpl39P62892 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpl39P62892 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpl39P62892 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpl39P62892 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpl39P62892 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Rpl39P62892 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC13.51□□□□□ -0.25
Rpl39P62892 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpl39P62892 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpl39P62892 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rpl39P62892 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpl39P62892 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpl39P62892 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpl39P62892 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Rpl39P62892 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rpl39P62892 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC13.5□□□□□ -0.25
Rpl39P62892 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpl39P62892 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpl39P62892 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Rpl39P62892 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Rpl39P62892 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rpl39P62892 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC13.5□□□□□ -0.25
Rpl39P62892 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpl39P62892 Gm5921-201ENSMUST00000075898 882 ntBASIC13.5□□□□□ -0.25
Rpl39P62892 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpl39P62892 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpl39P62892 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Rpl39P62892 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpl39P62892 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rpl39P62892 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rpl39P62892 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpl39P62892 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rpl39P62892 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpl39P62892 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpl39P62892 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rpl39P62892 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms