Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sec61a1P61620 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sec61a1P61620 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Sec61a1P61620 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sec61a1P61620 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sec61a1P61620 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sec61a1P61620 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sec61a1P61620 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sec61a1P61620 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sec61a1P61620 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sec61a1P61620 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sec61a1P61620 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sec61a1P61620 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sec61a1P61620 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sec61a1P61620 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.62■□□□□ 0.25
Sec61a1P61620 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Sec61a1P61620 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.62■□□□□ 0.25
Sec61a1P61620 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sec61a1P61620 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sec61a1P61620 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sec61a1P61620 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sec61a1P61620 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.62■□□□□ 0.25
Sec61a1P61620 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sec61a1P61620 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sec61a1P61620 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Sec61a1P61620 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sec61a1P61620 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.61■□□□□ 0.25
Sec61a1P61620 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sec61a1P61620 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sec61a1P61620 Gm12251-201ENSMUST00000117893 792 ntBASIC16.61■□□□□ 0.25
Sec61a1P61620 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.61■□□□□ 0.25
Sec61a1P61620 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.61■□□□□ 0.25
Sec61a1P61620 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Sec61a1P61620 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sec61a1P61620 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Sec61a1P61620 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sec61a1P61620 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sec61a1P61620 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sec61a1P61620 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sec61a1P61620 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sec61a1P61620 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Sec61a1P61620 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sec61a1P61620 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sec61a1P61620 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.6■□□□□ 0.25
Sec61a1P61620 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sec61a1P61620 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sec61a1P61620 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sec61a1P61620 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sec61a1P61620 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sec61a1P61620 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Sec61a1P61620 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sec61a1P61620 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sec61a1P61620 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sec61a1P61620 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sec61a1P61620 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Sec61a1P61620 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Sec61a1P61620 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sec61a1P61620 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sec61a1P61620 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sec61a1P61620 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sec61a1P61620 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sec61a1P61620 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sec61a1P61620 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sec61a1P61620 Gm43017-201ENSMUST00000198296 752 ntBASIC16.59■□□□□ 0.25
Sec61a1P61620 Grk6-206ENSMUST00000224995 2971 ntBASIC16.59■□□□□ 0.25
Sec61a1P61620 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sec61a1P61620 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Sec61a1P61620 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sec61a1P61620 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sec61a1P61620 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sec61a1P61620 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sec61a1P61620 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sec61a1P61620 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sec61a1P61620 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sec61a1P61620 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sec61a1P61620 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sec61a1P61620 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sec61a1P61620 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Sec61a1P61620 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Sec61a1P61620 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sec61a1P61620 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.58■□□□□ 0.24
Sec61a1P61620 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sec61a1P61620 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.58■□□□□ 0.24
Sec61a1P61620 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sec61a1P61620 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sec61a1P61620 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sec61a1P61620 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sec61a1P61620 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sec61a1P61620 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sec61a1P61620 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sec61a1P61620 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sec61a1P61620 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sec61a1P61620 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sec61a1P61620 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sec61a1P61620 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sec61a1P61620 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sec61a1P61620 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sec61a1P61620 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sec61a1P61620 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Sec61a1P61620 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms